Evidence map›Paper›PMID 26994474›Full record

ArticleJournal of experimental botany2016

Photorespiratory glycolate oxidase is essential for the survival of the red alga Cyanidioschyzon merolae under ambient CO2 conditions.

Nadine Rademacher, Ramona Kern, Takayuki Fujiwara, Tabea Mettler-Altmann, Shin-Ya Miyagishima, Martin Hagemann, Marion Eisenhut, Andreas P M Weber

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
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  4. Removal of phosphoglycolate in hyperthermophilic archaea.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  16. Article
  17. The PhotorespiratoryFrontiers in plant science · 2018
    Article
  18. Oxidation of P700 Ensures Robust Photosynthesis.Frontiers in plant science · 2018
    Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Nadine RademacherInstitute of Plant Biochemistry, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University, Universitätsstraße 1, 40225 Düsseldorf, Germany.
Ramona KernUniversity Rostock, Department Plant Physiology, Albert-Einstein-Straße 3, 18059 Rostock, Germany.
Takayuki FujiwaraDivision of Symbiosis and Cell Evolution, National Institute of Genetics, 1111 Yata, Mishima 411-8540, Shizuoka, Japan.
Tabea Mettler-AltmannInstitute of Plant Biochemistry, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University, Universitätsstraße 1, 40225 Düsseldorf, Germany.
Shin-Ya MiyagishimaDivision of Symbiosis and Cell Evolution, National Institute of Genetics, 1111 Yata, Mishima 411-8540, Shizuoka, Japan Japan Science and Technology Agency, CREST, 4-1-8 Honcho, Kawaguchi 332-0012, Saitama, Japan.
Martin HagemannUniversity Rostock, Department Plant Physiology, Albert-Einstein-Straße 3, 18059 Rostock, Germany.
Marion EisenhutInstitute of Plant Biochemistry, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University, Universitätsstraße 1, 40225 Düsseldorf, Germany.ORCID 0000-0002-2743-8630
Andreas P M WeberInstitute of Plant Biochemistry, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University, Universitätsstraße 1, 40225 Düsseldorf, Germany andreas.weber@hhu.de.ORCID 0000-0003-0970-4672
Cluster of Excellence on Plant Sciences · DENational Institute of Genetics · JPUniversity of Rostock · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Photorespiration is essential for all organisms performing oxygenic photosynthesis. The evolution of photorespiratory metabolism began among cyanobacteria and led to a highly compartmented pathway in plants. A molecular understanding of photorespiration in eukaryotic algae, such as glaucophytes, rhodophytes, and chlorophytes, is essential to unravel the evolution of this pathway. However, mechanistic detail of the photorespiratory pathway in red algae is scarce. The unicellular red alga Cyanidioschyzon merolae represents a model for the red lineage. Its genome is fully sequenced, and tools for targeted gene engineering are available. To study the function and importance of photorespiration in red algae, we chose glycolate oxidase (GOX) as the target. GOX catalyses the conversion of glycolate into glyoxylate, while hydrogen peroxide is generated as a side-product. The function of the candidate GOX from C. merolae was verified by the fact that recombinant GOX preferred glycolate over L-lactate as a substrate. Yellow fluorescent protein-GOX fusion proteins showed that GOX is targeted to peroxisomes in C. merolae The GOX knockout mutant lines showed a high-carbon-requiring phenotype with decreased growth and reduced photosynthetic activity compared to the wild type under ambient air conditions. Metabolite analyses revealed glycolate and glycine accumulation in the mutant cells after a shift from high CO2 conditions to ambient air. In summary, or results demonstrate that photorespiratory metabolism is essential for red algae. The use of a peroxisomal GOX points to a high photorespiratory flux as an ancestral feature of all photosynthetic eukaryotes.

Indexed as

Alcohol OxidoreductasesCarbon DioxideChlorophyllChlorophyll AGene Expression Regulation, PlantGene Knockout TechniquesGenes, PlantGlycolatesLactic AcidPeroxisomesPhotosynthesisReal-Time Polymerase Chain ReactionRhodophytaSubcellular FractionsAlcohol OxidoreductasesCarbon DioxideChlorophyllChlorophyll AGlycolatesglycolic acidglycollate oxidaseLactic AcidEvolutionglycolate oxidaseknockout mutantmetabolitesphotorespirationred alga.

Identifiers

PMID26994474
PMCPMC4867895
OpenAlexW2302505607

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.