Evidence map›Paper›PMID 26993791›Full record

ArticleParasites & vectors2016

RNAi-mediated gene knockdown by microinjection in the model entomopathogenic nematode Heterorhabditis bacteriophora.

Ramesh Ratnappan, Jonathan Vadnal, Melissa Keaney, Ioannis Eleftherianos, Damien O'Halloran, John M Hawdon

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  8. Review
  9. Molecular Regulators of Entomopathogenic Nematode-Bacterial Symbiosis.Results and problems in cell differentiation · 2020
    Review
  10. Article
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  15. Article
  16. Olfactory circuits and behaviors of nematodes.Current opinion in neurobiology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ramesh RatnappanDepartment of Microbiology Immunology and Tropical Medicine, George Washington University Medical Center, Washington, DC, 20037, USA.
Jonathan VadnalDepartment of Microbiology Immunology and Tropical Medicine, George Washington University Medical Center, Washington, DC, 20037, USA.
Melissa KeaneyDepartment of Microbiology Immunology and Tropical Medicine, George Washington University Medical Center, Washington, DC, 20037, USA.
Ioannis EleftherianosDepartment of Biological Sciences, George Washington University, Science and Engineering Hall, suite 6000, 800 22nd Street NW, Washington, DC, 20052, USA.
Damien O'HalloranDepartment of Biological Sciences, George Washington University, Science and Engineering Hall, suite 6000, 800 22nd Street NW, Washington, DC, 20052, USA.
John M HawdonDepartment of Microbiology Immunology and Tropical Medicine, George Washington University Medical Center, Washington, DC, 20037, USA. jhawdon@gwu.edu.
George Washington University · USWashington University Medical Center · US

Funding

Developing genetic tools for a new model of infection and immunityR21AI109517 · NIAID · GEORGE WASHINGTON UNIVERSITY · PI ELEFTHERIANOS, IOANNIS, HAWDON, JOHN M · 2014 to 2015
$431k
NIAID NIH HHS 5R21AI109517NIAID NIH HHS R21 AI109517
6 · The paper itself

Abstract

backgroundParasitic nematodes threaten the health of humans and livestock and cause a major financial and socioeconomic burden to modern society. Given the widespread distribution of diseases caused by parasitic nematodes there is an urgent need to develop tools that will elucidate the genetic complexity of host-parasite interactions. Heterorhabditis bacteriophora is a parasitic nematode that allows simultaneous monitoring of nematode infection processes and host immune function, and offers potential as a tractable model for parasitic nematode infections. However, molecular tools to investigate these processes are required prior to its widespread acceptance as a robust model organism. In this paper we describe microinjection in adult H. bacteriophora as a suitable means of dsRNA delivery to knockdown gene transcripts.

methodsRNA interference was used to knockdown four genes by injecting dsRNA directly into the gonad of adult hermaphrodite nematodes. RNAi phenotypes were scored in the F1 progeny on the fifth day post-injection, and knockdown of gene-specific transcripts was quantified with real-time quantitative RT-PCR (qRT-PCR).

resultsRNAi injection in adult hermaphrodites significantly decreased the level of target transcripts to varying degrees when compared with controls. The genes targeted by RNAi via injection included cct-2, nol-5, dpy-7, and dpy-13. In each case, RNAi knockdown was confirmed phenotypically by examining the progeny of injected animals, and also confirmed at the transcriptional level by real-time qRT-PCR.

conclusionsHere we describe for the first time the successful use of microinjection to knockdown gene transcripts in H. bacteriophora. This technique can be used widely to study the molecular basis of parasitism.

Indexed as

RNA InterferenceAnimalsGene Expression ProfilingGene Knockdown TechniquesMicroinjectionsParasitologyReal-Time Polymerase Chain ReactionRhabditoideaGene knockdownHeterorhabditis bacteriophoraMicroinjectionqRT-PCRRNAi

Identifiers

PMID26993791
PMCPMC4797128
OpenAlexW2297365114

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.