Evidence map›Paper›PMID 26993486›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2016

Quantitative trait loci controlling leaf appearance and curd initiation of cauliflower in relation to temperature.

Yaser Hasan, William Briggs, Claudia Matschegewski, Frank Ordon, Hartmut Stützel, Holger Zetzsche, Simon Groen, Ralf Uptmoor

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yaser HasanInstitute of Horticultural Production Systems, Leibniz Universität Hannover, Herrenhäuser Str. 2, Hannover, 30419, Germany.
William BriggsSyngenta Seeds BV, Westeinde 62, BK 1601, Enkhuizen, The Netherlands.
Claudia MatschegewskiDepartment of Agronomy, University of Rostock, Justus-von-Liebig-Weg 6, 18059, Rostock, Germany.
Frank OrdonJulius Kuehn-Institute, Federal Research Center for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, Erwin-Baur-Str. 27, 06484, Quedlinburg, Germany.
Hartmut StützelInstitute of Horticultural Production Systems, Leibniz Universität Hannover, Herrenhäuser Str. 2, Hannover, 30419, Germany.
Holger ZetzscheJulius Kuehn-Institute, Federal Research Center for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, Erwin-Baur-Str. 27, 06484, Quedlinburg, Germany.
Simon GroenSyngenta Seeds BV, Westeinde 62, BK 1601, Enkhuizen, The Netherlands.
Ralf UptmoorDepartment of Agronomy, University of Rostock, Justus-von-Liebig-Weg 6, 18059, Rostock, Germany. ralf.uptmoor@uni-rostock.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageQTL regions on chromosomes C06 and C09 are involved in temperature dependent time to curd induction in cauliflower. Temperature is the main environmental factor influencing curding time of cauliflower (Brassica oleracea var. botrytis). Temperatures above 20-22 °C inhibit development towards curding even in many summer cultivars. To identify quantitative trait loci (QTL) controlling curding time and its related traits in a wide range of different temperature regimes from 12 to 27 °C, a doubled haploid (DH) mapping population segregating for curding time was developed and days to curd initiation (DCI), leaf appearance rate (LAR), and final leaf number (FLN) were measured. The population was genotyped with 176 single nucleotide polymorphism (SNP) markers. Composite interval mapping (CIM) revealed repeatedly detected QTL for DCI on C06 and C09. The estimated additive effect increased at high temperatures. Significant QTL × environment interactions (Q × E) for FLN and DCI on C06 and C09 suggest that these hotspot regions have major influences on temperature mediated curd induction. 25 % of the DH lines did not induce curds at temperatures higher than 22 °C. Applying a binary model revealed a QTL with LOD >15 on C06. Nearly all lines carrying the allele of the reliable early maturing parental line (PL) on that locus induced curds at high temperatures while only half of the DH lines carrying the allele of the unreliable PL reached the generative phase during the experiment. Large variation in LAR was observed. QTL for LAR were detected repeatedly in several environments on C01, C04 and C06. Negative correlations between LAR and DCI and QTL co-localizations on C04 and C06 suggest that LAR has also effects on development towards curd induction.

Indexed as

Quantitative Trait LociTemperatureAllelesBrassicaChromosome MappingGenotypeHaploidyModels, GeneticPhenotypePlant LeavesPolymorphism, Single Nucleotide

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.