Evidence map›Paper›PMID 26992228›Full record

ArticleOncotarget2016

Divergent branches of mitochondrial signaling regulate specific genes and the viability of specialized cell types of differentiated yeast colonies.

Kristýna Podholová, Vítězslav Plocek, Stanislava Rešetárová, Helena Kučerová, Otakar Hlaváček, Libuše Váchová, Zdena Palková

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
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  5. Mitochondrial Research: Yeast and Human Cells as Models.International journal of molecular sciences · 2022
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  9. Analysis of Mitochondrial Retrograde Signaling in Yeast Model Systems.Methods in molecular biology (Clifton, N.J.) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Kristýna PodholováDepartment of Genetics and Microbiology, Faculty of Science, Charles University in Prague, Prague, Czech Republic.
Vítězslav PlocekDepartment of Genetics and Microbiology, Faculty of Science, Charles University in Prague, Prague, Czech Republic.
Stanislava RešetárováInstitute of Microbiology of the CAS, v.v.i., Prague, Czech Republic.
Helena KučerováDepartment of Genetics and Microbiology, Faculty of Science, Charles University in Prague, Prague, Czech Republic.
Otakar HlaváčekInstitute of Microbiology of the CAS, v.v.i., Prague, Czech Republic.
Libuše VáchováInstitute of Microbiology of the CAS, v.v.i., Prague, Czech Republic.
Zdena PalkováDepartment of Genetics and Microbiology, Faculty of Science, Charles University in Prague, Prague, Czech Republic.
Charles University · CZCzech Academy of Sciences, Institute of Microbiology · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mitochondrial retrograde signaling mediates communication from altered mitochondria to the nucleus and is involved in many normal and pathophysiological changes, including cell metabolic reprogramming linked to cancer development and progression in mammals. The major mitochondrial retrograde pathway described in yeast includes three activators, Rtg1p, Rtg2p and Rtg3p, and repressors, Mks1p and Bmh1p/Bmh2p. Using differentiated yeast colonies, we show that Mks1p-Rtg pathway regulation is complex and includes three branches that divergently regulate the properties and fate of three specifically localized cell subpopulations via signals from differently altered mitochondria. The newly identified RTG pathway-regulated genes ATO1/ATO2 are expressed in colonial upper (U) cells, the cells with active TORC1 that metabolically resemble tumor cells, while CIT2 is a typical target induced in one subpopulation of starving lower (L) cells. The viability of the second L cell subpopulation is strictly dependent on RTG signaling. Additional co-activators of Rtg1p-Rtg3p specific to particular gene targets of each branch are required to regulate cell differentiation.

Indexed as

Cell DifferentiationCell SurvivalGenes, FungalMitochondriaSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionSaccharomyces cerevisiae Proteinsageing and longevitydevelopment and differentiationmitochondrial retrograde signaling

Identifiers

PMID26992228
PMCPMC4941242
OpenAlexW2305814038

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.