Evidence map›Paper›PMID 26992172›Full record

ArticlePloS one2016

Biofilm Formation and Detachment in Gram-Negative Pathogens Is Modulated by Select Bile Acids.

Laura M Sanchez, Andrew T Cheng, Christopher J A Warner, Loni Townsley, Kelly C Peach, Gabriel Navarro, Nicholas J Shikuma, Walter M Bray, Romina M Riener, Fitnat H Yildiz and 1 more

Open access · goldAbstract readValidation Study
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 45 citations in OpenAlex.

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  8. Gut microbiota of Pacific white shrimp (Microbiology spectrum · 2023
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  11. Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
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  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. An Evaluation of the Antibacterial Properties of Tormentic Acid Congener and Extracts FromAdvances in pharmacological and pharmaceutical sciences · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Laura M SanchezDepartment of Chemistry and Biochemistry, University of California Santa Cruz, Santa Cruz, CA 95064, United States of America.
Andrew T ChengDepartment of Microbiology and Environmental Toxicology, University of California Santa Cruz, Santa Cruz, CA 95064, United States of America.
Christopher J A WarnerDepartment of Chemistry and Biochemistry, University of California Santa Cruz, Santa Cruz, CA 95064, United States of America.
Loni TownsleyDepartment of Microbiology and Environmental Toxicology, University of California Santa Cruz, Santa Cruz, CA 95064, United States of America.
Kelly C PeachDepartment of Chemistry and Biochemistry, University of California Santa Cruz, Santa Cruz, CA 95064, United States of America.
Gabriel NavarroDepartment of Chemistry and Biochemistry, University of California Santa Cruz, Santa Cruz, CA 95064, United States of America.
Nicholas J ShikumaDepartment of Microbiology and Environmental Toxicology, University of California Santa Cruz, Santa Cruz, CA 95064, United States of America.
Walter M BrayChemical Screening Center, University of California Santa Cruz, Santa Cruz, CA 95064, United States of America.
Romina M RienerDepartment of Chemistry and Biochemistry, University of California Santa Cruz, Santa Cruz, CA 95064, United States of America.
Fitnat H YildizDepartment of Microbiology and Environmental Toxicology, University of California Santa Cruz, Santa Cruz, CA 95064, United States of America.
Roger G LiningtonDepartment of Chemistry and Biochemistry, University of California Santa Cruz, Santa Cruz, CA 95064, United States of America.
University of California, Santa Cruz · USSimon Fraser University · CA

Funding

Discovery and Development of Biofilm Inhibitors that Target c-di-GMP signalingR21AI098836 · NIAID · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI LININGTON, ROGER G · 2012 to 2013
$398k
NIAID NIH HHS 1R21AI098836-01NIAID NIH HHS R21 AI098836NIGMS NIH HHS 2R25GM05803-12
6 · The paper itself

Abstract

Biofilms are a ubiquitous feature of microbial community structure in both natural and host environments; they enhance transmission and infectivity of pathogens and provide protection from human defense mechanisms and antibiotics. However, few natural products are known that impact biofilm formation or persistence for either environmental or pathogenic bacteria. Using the combination of a novel natural products library from the fish microbiome and an image-based screen for biofilm inhibition, we describe the identification of taurine-conjugated bile acids as inhibitors of biofilm formation against both Vibrio cholerae and Pseudomonas aeruginosa. Taurocholic acid (1) was isolated from the fermentation broth of the fish microbiome-derived strain of Rhodococcus erythropolis and identified using standard NMR and MS methods. Screening of the twelve predominant human steroidal bile acid components revealed that a subset of these compounds can inhibit biofilm formation, induce detachment of preformed biofilms under static conditions, and that these compounds display distinct structure-activity relationships against V. cholerae and P. aeruginosa. Our findings highlight the significance of distinct bile acid components in the regulation of biofilm formation and dispersion in two different clinically relevant bacterial pathogens, and suggest that the bile acids, which are endogenous mammalian metabolites used to solubilize dietary fats, may also play a role in maintaining host health against bacterial infection.

Indexed as

BiofilmsAnimalsFishesGram-Negative Bacteria

Identifiers

PMID26992172
PMCPMC4798295
OpenAlexW2301655579

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.