Evidence map›Paper›PMID 26991971›Full record

ArticleMicrobial biotechnology2016

Food borne bacterial models for detection of benzo[a]pyrene-DNA adducts formation using RAPD-PCR.

Valentina Lanzone, Rosanna Tofalo, Giuseppe Fasoli, Giorgia Perpetuini, Giovanna Suzzi, Manuel Sergi, Federica Corrado, Dario Compagnone

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 9 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Valentina LanzoneFaculty of BioScience and Technology for Food, Agriculture and Environment, University of Teramo, Mosciano Sant'Angelo (TE), 64023, Italy.
Rosanna TofaloFaculty of BioScience and Technology for Food, Agriculture and Environment, University of Teramo, Mosciano Sant'Angelo (TE), 64023, Italy.
Giuseppe FasoliFaculty of BioScience and Technology for Food, Agriculture and Environment, University of Teramo, Mosciano Sant'Angelo (TE), 64023, Italy.
Giorgia PerpetuiniFaculty of BioScience and Technology for Food, Agriculture and Environment, University of Teramo, Mosciano Sant'Angelo (TE), 64023, Italy.
Giovanna SuzziFaculty of BioScience and Technology for Food, Agriculture and Environment, University of Teramo, Mosciano Sant'Angelo (TE), 64023, Italy.
Manuel SergiFaculty of BioScience and Technology for Food, Agriculture and Environment, University of Teramo, Mosciano Sant'Angelo (TE), 64023, Italy.
Federica CorradoIstituto Zooprofilattico Sperimentale del Mezzogiorno, Via Salute 2, Portici, Napoli, 80055, Italy.
Dario CompagnoneFaculty of BioScience and Technology for Food, Agriculture and Environment, University of Teramo, Mosciano Sant'Angelo (TE), 64023, Italy.
University of Teramo · ITIstituto Zooprofilattico Sperimentale del Mezzogiorno · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Random amplified polymorphic DNA (RAPD) PCR is a feasible method to evaluate genotoxin-induced DNA damage and mutations. In this study, Lactobacillus plantarum ATCC 14917T, Enterococcus faecium DSMZ 20477T, Escherichia coli PQ37 and Saccharomyces cerevisiae S441 were screened for DNA genetic alterations by DNA fingerprinting using M13 and LA1 primers after treatment with three compounds forming covalent adducts with DNA [benzo[a]pyrenediol epoxide (BPDE), methyl methanesulfonate and 1,2,3,4-diepoxybutane (DEB)]. M13 RAPD fingerprinting revealed that the total number of bands decreased in all treated DNA compared to control samples and generally the lost bands were characterized by high molecular weight. Some extra bands were detected for L. plantarum and E. faecium, while in E. coli and S. cerevisiae DNAs BPDE and DEB treatments did not result in new extra bands. Besides qualitatively analysis, cluster analysis based on Unweighted Pair-Group Method with Average algorithm was performed to compare DNA fingerprints before and after treatments. This analysis confirmed the absence of significant differences between negative controls and treated DNA in S. cerevisiae and E. coli however the disappearance of some bands can be detected. The data indicate that this approach can be used for DNA damage detection and mutations induced by genotoxic compounds and highlighted the possible use of L. plantarum and E. faecium M13 based fingerprinting as reference for hazard identification in risk assessment.

Indexed as

DNA DamageBacteriaBenzo(a)pyreneDNA AdductsDNA, BacterialDNA FingerprintingDNA, FungalEpoxy CompoundsMethyl MethanesulfonateMutagensRandom Amplified Polymorphic DNA TechniqueSaccharomyces cerevisiaeBenzo(a)pyrenebenzo(a)pyrene-DNA adductdiepoxybutaneDNA AdductsDNA, BacterialDNA, FungalEpoxy CompoundsMethyl MethanesulfonateMutagens

Identifiers

PMID26991971
PMCPMC4835576
OpenAlexW2334310270

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.