Evidence map›Paper›PMID 26991954›Full record

ArticleMolecular plant pathology2017

Genetic alteration of UDP-rhamnose metabolism in Botrytis cinerea leads to the accumulation of UDP-KDG that adversely affects development and pathogenicity.

Liang Ma, Omar Salas, Kyle Bowler, Liat Oren-Young, Maor Bar-Peled, Amir Sharon

Open access · hybridAbstract read
In one paragraph

Article in Molecular plant pathology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  5. Frontiers in microbiology · 2024
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  6. The Adaptation ofJournal of fungi (Basel, Switzerland) · 2023
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  9. Disruption of protein rhamnosylation affects theCell surface (Amsterdam, Netherlands) · 2021
    Article
  10. Article
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  12. Frontiers in plant science · 2021
    Article
  13. The Destructive Fungal PathogenPathogens (Basel, Switzerland) · 2020
    Review
  14. Article
  15. Article
  16. Diversity of Cell Wall Related Proteins in Human Pathogenic Fungi.Journal of fungi (Basel, Switzerland) · 2017
    Article
  17. Article
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  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Liang MaDepartment of Molecular Biology and Ecology of Plants, Tel Aviv University, Tel Aviv, 69978, Israel.
Omar SalasComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Kyle BowlerComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Liat Oren-YoungDepartment of Molecular Biology and Ecology of Plants, Tel Aviv University, Tel Aviv, 69978, Israel.
Maor Bar-PeledComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Amir SharonDepartment of Molecular Biology and Ecology of Plants, Tel Aviv University, Tel Aviv, 69978, Israel.
Tel Aviv University · ILUniversity of Georgia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Botrytis cinerea is a model plant-pathogenic fungus that causes grey mould and rot diseases in a wide range of agriculturally important crops. A previous study has identified two enzymes and corresponding genes (bcdh, bcer) that are involved in the biochemical transformation of uridine diphosphate (UDP)-glucose, the major fungal wall nucleotide sugar precursor, to UDP-rhamnose. We report here that deletion of bcdh, the first biosynthetic gene in the metabolic pathway, or of bcer, the second gene in the pathway, abolishes the production of rhamnose-containing glycans in these mutant strains. Deletion of bcdh or double deletion of both bcdh and bcer has no apparent effect on fungal development or pathogenicity. Interestingly, deletion of the bcer gene alone adversely affects fungal development, giving rise to altered hyphal growth and morphology, as well as reduced sporulation, sclerotia production and virulence. Treatments with wall stressors suggest the alteration of cell wall integrity. Analysis of nucleotide sugars reveals the accumulation of the UDP-rhamnose pathway intermediate UDP-4-keto-6-deoxy-glucose (UDP-KDG) in hyphae of the Δbcer strain. UDP-KDG could not be detected in hyphae of the wild-type strain, indicating fast conversion to UDP-rhamnose by the BcEr enzyme. The correlation between high UDP-KDG and modified cell wall and developmental defects raises the possibility that high levels of UDP-KDG result in deleterious effects on cell wall composition, and hence on virulence. This is the first report demonstrating that the accumulation of a minor nucleotide sugar intermediate has such a profound and adverse effect on a fungus. The ability to identify molecules that inhibit Er (also known as NRS/ER) enzymes or mimic UDP-KDG may lead to the development of new antifungal drugs.

Indexed as

Gene DeletionBotrytisCarbonCell WallFabaceaeGenes, FungalMetabolic Networks and PathwaysMyceliumPhenotypePlant DiseasesPlant LeavesRhamnoseStress, PhysiologicalUridine DiphosphateUridine Diphosphate SugarsCarbonRhamnoseUDP-rhamnoseUridine DiphosphateUridine Diphosphate SugarsBotrytis cinereafungal nucleotide sugar metabolismfungal virulence and pathogenicityNRS/ERUDP-4-keto-6-deoxy-glucose (UDP-KDG)UDP-Glc-4,6-dehydrataseUDP-rhamnose

Identifiers

PMID26991954
PMCPMC6638282
OpenAlexW2298024962

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.