Evidence map›Paper›PMID 26991351›Full record

ArticleBiometrics2016

Circular piecewise regression with applications to cell-cycle data.

Cristina Rueda, Miguel A Fernández, Sandra Barragán, Kanti V Mardia, Shyamal D Peddada

Abstract read
In one paragraph

Article in Biometrics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Cristina RuedaDepartamento de Estadística e I.O., Universidad de Valladolid, 47011 Valladolid, Spain.
Miguel A FernándezDepartamento de Estadística e I.O., Universidad de Valladolid, 47011 Valladolid, Spain.
Sandra BarragánDepartamento de Estadística e I.O., Universidad de Valladolid, 47011 Valladolid, Spain.
Kanti V MardiaDepartment of Statistics, University of Oxford, Oxford, U.K., and Department of Statistics, University of Leeds, Leeds, U.K.
Shyamal D PeddadaBiostatistics and Computational Biology Branch NIEHS (NIH), Research Triangle Park, NC, U.S.A.

Funding

Statistical Methods with Applications to Toxicology and Microarray dataZIAES101744 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI PEDDADA, SHYAMAL · 2009 to 2017
$4.2M
Statistical Theory and Methodology with Applications toZ01ES101744 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI PEDDADA, SHYAMAL · 2004 to 2008
$803k
Intramural NIH HHS Z01 ES101744
6 · The paper itself

Abstract

Applications of circular regression models appear in many different fields such as evolutionary psychology, motor behavior, biology, and, in particular, in the analysis of gene expressions in oscillatory systems. Specifically, for the gene expression problem, a researcher may be interested in modeling the relationship among the phases of cell-cycle genes in two species with differing periods. This challenging problem reduces to the problem of constructing a piecewise circular regression model and, with this objective in mind, we propose a flexible circular regression model which allows different parameter values depending on sectors along the circle. We give a detailed interpretation of the parameters in the model and provide maximum likelihood estimators. We also provide a model selection procedure based on the concept of generalized degrees of freedom. The model is then applied to the analysis of two different cell-cycle data sets and through these examples we highlight the power of our new methodology.

Indexed as

Biological ClocksModels, StatisticalRegression AnalysisCell CycleComputer SimulationLikelihood FunctionsModels, BiologicalSaccharomycesChange pointsCircular-circular regressionCircular dataGene expressionGeneralized AICVon Mises distribution

Identifiers

PMID26991351
PMCPMC5026859

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.