Evidence map›Paper›PMID 26991336›Full record

ArticleBritish journal of clinical pharmacology2016

The impact of genetic polymorphisms on the pharmacokinetics of efavirenz in African children.

Andrzej Bienczak, Adrian Cook, Lubbe Wiesner, Adeniyi Olagunju, Veronica Mulenga, Cissy Kityo, Addy Kekitiinwa, Andrew Owen, A Sarah Walker, Diana M Gibb and 3 more

Open access · hybridAbstract read
In one paragraph

Article in British journal of clinical pharmacology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 36 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Pharmacogenetics ofJournal of personalized medicine · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. New Directions for the Consideration of HIV: Heterogeneity and the Cognition of Time.New directions for child and adolescent development · 2020
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 5 countries.

Andrzej BienczakDivision of Clinical Pharmacology, Department of Medicine, University of Cape Town, Cape Town, South Africa.
Adrian CookMRC Clinical Trials Unit at University College London, London, UK.
Lubbe WiesnerDivision of Clinical Pharmacology, Department of Medicine, University of Cape Town, Cape Town, South Africa.
Adeniyi OlagunjuDepartment of Molecular and Clinical Pharmacology, University of Liverpool, Liverpool, UK.
Veronica MulengaUniversity Teaching Hospital, Department of Paediatrics and Child Health, Lusaka, Zambia.
Cissy KityoJoint Clinical Research Centre, Kampala, Uganda.
Addy KekitiinwaBaylor College of Medicine Bristol Myers Squibb Children's Clinical Centre of Excellence, Kampala, Uganda / Gulu Regional Centre of Excellence, Gulu, Uganda.
Andrew OwenDepartment of Molecular and Clinical Pharmacology, University of Liverpool, Liverpool, UK.
A Sarah WalkerMRC Clinical Trials Unit at University College London, London, UK.
Diana M GibbMRC Clinical Trials Unit at University College London, London, UK.
Helen McIlleronDivision of Clinical Pharmacology, Department of Medicine, University of Cape Town, Cape Town, South Africa.
David BurgerDepartment of Pharmacy, Radboud University Nijmegen Medical Centre, Nijmegen, the Netherlands.
Paolo DentiDivision of Clinical Pharmacology, Department of Medicine, University of Cape Town, Cape Town, South Africa.
University of Cape Town · ZAUniversity College London · GBUniversity of Liverpool · GBBaylor College of Medicine Children’s Foundation · UGJoint Clinical Research Centre · UGMRC Clinical Trials Unit at UCL · GBRadboud University Nijmegen · NLUniversity Teaching Hospital · ZM

Funding

Statistical and Data Management Center (SDMC), AIDS Clinical Trials Group (ACTG)UM1AI068634 · NIAID · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI Marlene Ann Cooper, Michael David Hughes · 2011 to 2026
$246.6M
Validation, CLIA and Qualification (VQC): Enhancing the RS ratio as a tool for AIDS Clinical Trial Group (ACTG) tuberculosis trialsUM1AI106701 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Grace M Aldrovandi · 2014 to 2026
$116.8M
International Maternal Pediatric Adolescent AIDS Clinical Trials (IMPAACT) GroupU01AI068632 · NIAID · SOCIAL AND SCIENTIFIC SYSTEMS, INC. · PI JACKSON, J BROOKS · 2006 to 2010
$109.7M
Medical Research Council G0800247Medical Research Council MC_U122886353Medical Research Council MC_UU_12023/17Medical Research Council MC_UU_12023/26NIAID NIH HHS U01 AI068632NIAID NIH HHS UM1 AI068634NIAID NIH HHS UM1 AI106701
6 · The paper itself

Abstract

aimsUsing a model-based approach, the efavirenz steady-state pharmacokinetics in African children is characterized, quantifying demographic and genotypic effects on the drug's disposition. Simulations are also conducted allowing prediction of optimized doses of efavirenz in this population.

methodsWe modelled the steady-state population pharmacokinetics of efavirenz in Ugandan and Zambian children using nonlinear mixed-effects modelling. Individual mid-dose efavirenz concentrations were derived and simulations explored genotype-based dose optimization strategies.

resultsA two-compartment model with absorption through transit compartments well described 2086 concentration-time points in 169 children. The combined effect of single nucleotide polymorphisms (SNPs) 516G>T and 983T>C explained 44.5% and 14.7% of the variability in efavirenz clearance and bioavailability, respectively. The detected frequencies of composite CYP2B6 genotype were 0.33 for 516GG|983TT, 0.35 for 516GT|983TT, 0.06 for 516GG|983TC, 0.18 for 516TT|983TT, 0.07 516GT|983TC and 0.01 for 516GG|983CC. The corresponding estimated clearance rates were 6.94, 4.90, 3.93, 1.92, 1.36, and 0.74 l h(-1) for a 15.4 kg child and median (95% CI) observed mid-dose concentrations 1.55 (0.51-2.94), 2.20 (0.97-4.40), 2.03 (1.19-4.53), 7.55 (2.40-14.74), 7.79 (3.66-24.59) and 18.22 (11.84-22.76) mg l(-1) , respectively. Simulations showed that wild-type individuals had exposures at the bottom of therapeutic range, while slower metabolizers were overexposed.

conclusionsDosage guidelines for African children should take into consideration the combined effect of SNPs CYP2B6 516G>T and 983T>C.

Indexed as

Models, BiologicalAdolescentAlkynesBenzoxazinesBlack PeopleChildChild, PreschoolComputer SimulationCyclopropanesCytochrome P-450 CYP2B6Dose-Response Relationship, DrugFemaleGenotypeHumansMaleNonlinear DynamicsAlkynesBenzoxazinesCyclopropanesCYP2B6 protein, humanCytochrome P-450 CYP2B6efavirenzReverse Transcriptase InhibitorsAfricachildrenCYP2B6efavirenzpharmacogenetics

Identifiers

PMID26991336
PMCPMC4917805
OpenAlexW2300467881

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.