Evidence map›Paper›PMID 26991299›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]

Isolation and expression of two polyketide synthase genes from Trichoderma harzianum 88 during mycoparasitism.

Lin Yao, Chong Tan, Jinzhu Song, Qian Yang, Lijie Yu, Xinling Li

Open access · hybridAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Strain improvement ofFrontiers in microbiology · 2023
    Review
  3. International journal of molecular sciences · 2022
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Lin YaoKey Laboratory of Molecular and Cytogenetics and Genetic Breeding of Heilongjiang Province, Harbin Normal University, Harbin, PR China.
Chong TanResearch Center on Life Sciences and Environmental Sciences, Harbin University of Commerce, Harbin, PR China.
Jinzhu SongDepartment of Life Science and Engineering, Harbin Institute of Technology, Harbin, PR China.
Qian YangDepartment of Life Science and Engineering, Harbin Institute of Technology, Harbin, PR China.
Lijie YuKey Laboratory of Molecular and Cytogenetics and Genetic Breeding of Heilongjiang Province, Harbin Normal University, Harbin, PR China.
Xinling LiKey Laboratory of Molecular and Cytogenetics and Genetic Breeding of Heilongjiang Province, Harbin Normal University, Harbin, PR China. Electronic address: qianyangcn@yeah.net.
Harbin Normal University · CNHarbin Institute of Technology · CNHarbin University of Commerce · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metabolites of mycoparasitic fungal species such as Trichoderma harzianum 88 have important biological roles. In this study, two new ketoacyl synthase (KS) fragments were isolated from cultured Trichoderma harzianum 88 mycelia using degenerate primers and analysed using a phylogenetic tree. The gene fragments were determined to be present as single copies in Trichoderma harzianum 88 through southern blot analysis using digoxigenin-labelled KS gene fragments as probes. The complete sequence analysis in formation of pksT-1 (5669bp) and pksT-2 (7901bp) suggests that pksT-1 exhibited features of a non-reducing type I fungal PKS, whereas pksT-2 exhibited features of a highly reducing type I fungal PKS. Reverse transcription polymerase chain reaction indicated that the isolated genes are differentially regulated in Trichoderma harzianum 88 during challenge with three fungal plant pathogens, which suggests that they participate in the response of Trichoderma harzianum 88 to fungal plant pathogens. Furthermore, disruption of the pksT-2 encoding ketosynthase-acyltransferase domains through Agrobacterium-mediated gene transformation indicated that pksT-2 is a key factor for conidial pigmentation in Trichoderma harzianum 88.

Indexed as

Amino Acid SequenceFungal ProteinsGene Expression Regulation, FungalMolecular Sequence DataMyceliumPlant DiseasesPolyketide SynthasesSequence AlignmentTrichodermaFungal ProteinsPolyketide SynthasesFungal plant pathogensGene disruptionPolyketide syntheseReal time quantitative PCR

Identifiers

PMID26991299
PMCPMC4874624
OpenAlexW2314660008

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.