Evidence map›Paper›PMID 26991286›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]

Characterization of the variable region in the class 1 integron of antimicrobial-resistant Escherichia coli isolated from surface water.

Natália Canal, Karine Lena Meneghetti, Clara Ponzi de Almeida, Marina da Rosa Bastos, Letícia Muner Otton, Gertrudes Corção

Open access · hybridAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Prevalence of Antibiotic Resistance Determinants in Carbapenem-ResistantInternational journal of molecular and cellular medicine · 2025
    Article
  3. Prevalence of blaBMC infectious diseases · 2024
    Article
  4. Detecting Class 1 Integrons and Their Variable Regions inAntibiotics (Basel, Switzerland) · 2024
    Article
  5. Article
  6. Article
  7. Profile of Bacterial Community and Antibiotic Resistance Genes in Typical Vegetable Greenhouse Soil.International journal of environmental research and public health · 2022
    Article
  8. Article
  9. Characterization of Integrons and Quinolone Resistance in ClinicalInternational journal of microbiology · 2021
    Article
  10. Antibiotic resistance inVeterinary world · 2020
    Review
  11. Article
  12. Dissemination of Multidrug-Resistant CommensalFrontiers in microbiology · 2019
    Article
  13. Genetic Environment ofFrontiers in microbiology · 2018
    Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Natália CanalDepartamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil.
Karine Lena MeneghettiDepartamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil.
Clara Ponzi de AlmeidaDepartamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil.
Marina da Rosa BastosDepartamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil.
Letícia Muner OttonDepartamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil.
Gertrudes CorçãoDepartamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil. Electronic address: corcao@ufrgs.br.
Universidade Federal do Rio Grande do Sul · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fecal bacteria are considered to be a potential reservoir of antimicrobial resistance genes in the aquatic environment and could horizontally transfer these genes to autochthonous bacteria when carried on transferable and/or mobile genetic elements. Such circulation of resistance genes constitutes a latent public health hazard. The aim of this study was to characterize the variable region of the class 1 integron and relate its genetic content to resistance patterns observed in antimicrobial-resistant Escherichia coli isolated from the surface waters of Patos Lagoon, Southern Brazil. Genetic diversity of the isolates and presence of the qacEΔ1 gene, which confers resistance to quaternary ammonium compounds, were also investigated. A total of 27 isolates were analyzed. The variable region harbored dfrA17, dfrA1 and dfrA12 genes, which confer resistance to trimethoprim, and aadA1, aadA5 and aadA22 genes that encode resistance to streptomycin/spectinomycin. Most of the isolates were considered resistant to quaternary ammonium compounds and all of them carried the qacEΔ1 gene at the 3' conserved segment of the integron. ERIC-PCR analyses of E. coli isolates that presented the integrons showed great genetic diversity, indicating diverse sources of contamination in this environment. These results suggest that fecal bacteria with class 1 integrons in aquatic environments are potentially important reservoirs of antibiotic-resistance genes and may transfer these elements to other bacteria that are capable of infecting humans.

Indexed as

Drug Resistance, BacterialIntegronsAnti-Bacterial AgentsBrazilEscherichia coliEscherichia coli ProteinsFresh WaterGenetic VariationPhylogenyAnti-Bacterial AgentsEscherichia coli ProteinsAntibiotic resistanceClass 1 integronEscherichia coliSuperficial water

Identifiers

PMID26991286
PMCPMC4874607
OpenAlexW2324817136

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.