Evidence map›Paper›PMID 26989903›Full record

ArticlePLoS computational biology2016

Feedback, Lineages and Self-Organizing Morphogenesis.

Sameeran Kunche, Huaming Yan, Anne L Calof, John S Lowengrub, Arthur D Lander

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  10. Engineering organoids.Nature reviews. Materials · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sameeran KuncheDepartment of Biomedical Engineering, University of California, Irvine, Irvine, California, United States of America.
Huaming YanCenter for Complex Biological Systems, University of California, Irvine, Irvine, California, United States of America.
Anne L CalofCenter for Complex Biological Systems, University of California, Irvine, Irvine, California, United States of America.
John S LowengrubDepartment of Biomedical Engineering, University of California, Irvine, Irvine, California, United States of America.
Arthur D LanderDepartment of Biomedical Engineering, University of California, Irvine, Irvine, California, United States of America.
University of California, Irvine · US

Funding

Uncover Strategies Used By Biological SystemsP50GM076516 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI LANDER, ARTHUR D · 2007 to 2016
$25.1M
Spatial Dynamics of Tissue and Organ Size ControlR01NS095355 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI CALOF, ANNE LEIGHTON, LANDER, ARTHUR D · 2015 to 2019
$2.1M
Training Program in Systems Biology of DevelopmentT32HD060555 · NICHD · UNIVERSITY OF CALIFORNIA-IRVINE · PI LANDER, ARTHUR D · 2009 to 2013
$1.3M
NICHD NIH HHS T32 HD060555NIGMS NIH HHS P50 GM076516NIGMS NIH HHS P50-GM076516NINDS NIH HHS R01 NS095355NINDS NIH HHS R01-NS095355
6 · The paper itself

Abstract

Feedback regulation of cell lineage progression plays an important role in tissue size homeostasis, but whether such feedback also plays an important role in tissue morphogenesis has yet to be explored. Here we use mathematical modeling to show that a particular feedback architecture in which both positive and negative diffusible signals act on stem and/or progenitor cells leads to the appearance of bistable or bi-modal growth behaviors, ultrasensitivity to external growth cues, local growth-driven budding, self-sustaining elongation, and the triggering of self-organization in the form of lamellar fingers. Such behaviors arise not through regulation of cell cycle speeds, but through the control of stem or progenitor self-renewal. Even though the spatial patterns that arise in this setting are the result of interactions between diffusible factors with antagonistic effects, morphogenesis is not the consequence of Turing-type instabilities.

Indexed as

Models, BiologicalAnimalsCell Cycle ProteinsCell DifferentiationCell LineageComputer SimulationFeedback, PhysiologicalGene Expression Regulation, DevelopmentalHumansMorphogenesisSignal TransductionStem CellsCell Cycle Proteins

Identifiers

PMID26989903
PMCPMC4798729
OpenAlexW2300075358

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.