Evidence map›Paper›PMID 26989163›Full record

ArticleCerebral cortex (New York, N.Y. : 1991)2017

Integrative Single-Cell Transcriptomics Reveals Molecular Networks Defining Neuronal Maturation During Postnatal Neurogenesis.

Yu Gao, Feifei Wang, Brian E Eisinger, Laurel E Kelnhofer, Emily M Jobe, Xinyu Zhao

Open access · bronzeAbstract read
In one paragraph

Article in Cerebral cortex (New York, N.Y. : 1991), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Neuron and Brain Maturation 2.0.International journal of molecular sciences · 2023
    Article
  6. Review
  7. Review
  8. Publicly availableFrontiers in neuroscience · 2023
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Doublecortin-expressing cell types in temporal lobe epilepsy.Acta neuropathologica communications · 2018
    Article
  17. Asymmetric Golgi Repositioning: A Prerequisite for Appropriate Dendrite Formation in Adult-Born Neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2018
    Article
  18. Repositioning of Somatic Golgi Apparatus Is Essential for the Dendritic Establishment of Adult-Born Hippocampal Neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2018
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Yu GaoWaisman Center.
Feifei WangWaisman Center.
Brian E EisingerWaisman Center.
Laurel E KelnhoferWaisman Center.
Emily M JobeWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.
Xinyu ZhaoWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.
Pisgah Astronomical Research Institute · USFudan University · CN

Funding

WISCONSIN CENTER ON MENTAL RETARDATION: CORE SUPPORTP30HD003352 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI SVAREN, JOHN P · 1985 to 2015
$25.2M
GRADUATE TRAINING IN MOLECULAR BIOSCIENCEST32GM007215 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HULL, CHRISTINA M · 1985 to 2018
$22.5M
Translational Regulation of Adult Neural Stem CellsR01MH078972 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI ZHAO, XINYU · 2007 to 2016
$4.3M
Role of small RNAs in NeurogenesisR01MH080434 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI ZHAO, XINYU · 2007 to 2015
$2.9M
Coordinate actions between methyl-CpG binding proteins in neuronal developmentR21NS095632 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI ZHAO, XINYU · 2015 to 2016
$418k
Elucidating Molecular Mediators of Environmentally Induced NeurogenesisF32NS094120 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI EISINGER, BRIAN E · 2016 to 2017
$79k
NICHD NIH HHS P30 HD003352NIGMS NIH HHS T32 GM007215NIMH NIH HHS R01 MH078972NIMH NIH HHS R01 MH080434NINDS NIH HHS F32 NS094120NINDS NIH HHS R21 NS095632
6 · The paper itself

Abstract

In mammalian hippocampus, new neurons are continuously produced from neural stem cells throughout life. This postnatal neurogenesis may contribute to information processing critical for cognition, adaptation, learning, and memory, and is implicated in numerous neurological disorders. During neurogenesis, the immature neuron stage defined by doublecortin (DCX) expression is the most sensitive to regulation by extrinsic factors. However, little is known about the dynamic biology within this critical interval that drives maturation and confers susceptibility to regulatory signals. This study aims to test the hypothesis that DCX-expressing immature neurons progress through developmental stages via activity of specific transcriptional networks. Using single-cell RNA-seq combined with a novel integrative bioinformatics approach, we discovered that individual immature neurons can be classified into distinct developmental subgroups based on characteristic gene expression profiles and subgroup-specific markers. Comparisons between immature and more mature subgroups revealed novel pathways involved in neuronal maturation. Genes enriched in less mature cells shared significant overlap with genes implicated in neurodegenerative diseases, while genes positively associated with neuronal maturation were enriched for autism-related gene sets. Our study thus discovers molecular signatures of individual immature neurons and unveils potential novel targets for therapeutic approaches to treat neurodevelopmental and neurological diseases.

Indexed as

AnimalsAutomation, LaboratoryDoublecortin Domain ProteinsDoublecortin ProteinGene Expression ProfilingHippocampusImmunohistochemistryMaleMice, Inbred C57BLMice, TransgenicMicroscopy, ConfocalMicrotubule-Associated ProteinsNeurogenesisNeuronsNeuropeptidesPrincipal Component AnalysisDcx protein, mouseDoublecortin Domain ProteinsDoublecortin ProteinMicrotubule-Associated ProteinsNeuropeptidesdoublecortinneurogenesisneuronal maturationsingle-cell RNA-seqtranscriptome

Identifiers

PMID26989163
PMCPMC6361276
OpenAlexW2302451838

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.