Evidence map›Paper›PMID 26986737›Full record

ArticlePloS one2016

Haplotypes of the D-Amino Acid Oxidase Gene Are Significantly Associated with Schizophrenia and Its Neurocognitive Deficits.

Yu-Li Liu, Sheng-Chang Wang, Hai-Gwo Hwu, Cathy Shen-Jang Fann, Ueng-Cheng Yang, Wei-Chih Yang, Pei-Chun Hsu, Chien-Ching Chang, Chun-Chiang Wen, Jyy-Jih Tsai-Wu and 9 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. D-Amino Acids as a Biomarker in Schizophrenia.Diseases (Basel, Switzerland) · 2022
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Expression of D-Amino Acid Oxidase (Frontiers in neuroanatomy · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 2 countries.

Yu-Li LiuCenter for Neuropsychiatric Research, National Health Research Institutes, Miaoli 35053, Taiwan.
Sheng-Chang WangCenter for Neuropsychiatric Research, National Health Research Institutes, Miaoli 35053, Taiwan.
Hai-Gwo HwuDepartment of Psychiatry, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei 10051, Taiwan.
Cathy Shen-Jang FannInstitute of Biomedical Sciences, Academia Sinica, Taipei 11529, Taiwan.
Ueng-Cheng YangInstitute of Bioinformatics, National Yang-Ming University, Taipei 112, Taiwan.
Wei-Chih YangInstitute of Biomedical Sciences, Academia Sinica, Taipei 11529, Taiwan.
Pei-Chun HsuGraduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei 10051, Taiwan.
Chien-Ching ChangInstitute of Biomedical Sciences, Academia Sinica, Taipei 11529, Taiwan.
Chun-Chiang WenDepartment of Psychiatry, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei 10051, Taiwan.
Jyy-Jih Tsai-WuDepartment of Medical Research, National Taiwan University Hospital, Taipei 10051, Taiwan.
Tzung-Jeng HwangDepartment of Psychiatry, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei 10051, Taiwan.
Ming H HsiehDepartment of Psychiatry, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei 10051, Taiwan.
Chen-Chung LiuDepartment of Psychiatry, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei 10051, Taiwan.
Yi-Ling ChienDepartment of Psychiatry, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei 10051, Taiwan.
Chiu-Ping FangCenter for Neuropsychiatric Research, National Health Research Institutes, Miaoli 35053, Taiwan.
Stephen V FaraoneMedical Genetics Research Center and Department of Psychiatry and Neuroscience & Physiology, SUNY Upstate Medical University, Syracuse, NY 13210, United States of America.
Ming T TsuangHarvard Institute of Psychiatric Epidemiology and Genetics, and Departments of Epidemiology and Psychiatry, Harvard University, Boston, Massachusetts, 02115, United States of America.
Wei J ChenInstitute of Epidemiology and Preventive Medicine, College of Public Health, National Taiwan University, Taipei 10051, Taiwan.
Chih-Min LiuDepartment of Psychiatry, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei 10051, Taiwan.
National Taiwan University · TWNational Health Research Institutes · TWInstitute of Biomedical Sciences, Academia Sinica · TWNational Taiwan University Hospital · TWHarvard University · USNational Yang Ming Chiao Tung University · TW

Funding

GENETIC LINKAGE STUDY OF SCHIZOPHRENIAR01MH059624 · NIMH · MASSACHUSETTS MENTAL HEALTH INSTITUTE · PI TSUANG, MING T. · 1998 to 2001
$1.2M
NIMH NIH HHS IR01 MH 59624-01
6 · The paper itself

Abstract

D-amino acid oxidase (DAO) has been reported to be associated with schizophrenia. This study aimed to search for genetic variants associated with this gene. The genomic regions of all exons, highly conserved regions of introns, and promoters of this gene were sequenced. Potentially meaningful single-nucleotide polymorphisms (SNPs) obtained from direct sequencing were selected for genotyping in 600 controls and 912 patients with schizophrenia and in a replicated sample consisting of 388 patients with schizophrenia. Genetic associations were examined using single-locus and haplotype association analyses. In single-locus analyses, the frequency of the C allele of a novel SNP rs55944529 located at intron 8 was found to be significantly higher in the original large patient sample (p = 0.016). This allele was associated with a higher level of DAO mRNA expression in the Epstein-Barr virus-transformed lymphocytes. The haplotype distribution of a haplotype block composed of rs11114083-rs2070586-rs2070587-rs55944529 across intron 1 and intron 8 was significantly different between the patients and controls and the haplotype frequencies of AAGC were significantly higher in patients, in both the original (corrected p < 0.0001) and replicated samples (corrected p = 0.0003). The CGTC haplotype was specifically associated with the subgroup with deficits in sustained attention and executive function and the AAGC haplotype was associated with the subgroup without such deficits. The DAO gene was a susceptibility gene for schizophrenia and the genomic region between intron 1 and intron 8 may harbor functional genetic variants, which may influence the mRNA expression of DAO and neurocognitive functions in schizophrenia.

Indexed as

Polymorphism, Single NucleotideAdolescentAdultD-Amino-Acid OxidaseFemaleGenetic Predisposition to DiseaseHaplotypesHumansMaleSchizophreniaYoung AdultD-Amino-Acid Oxidase

Identifiers

PMID26986737
PMCPMC4795637
OpenAlexW2323989027

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.