ArticlePloS one2016
Development and Genetic Control of Plant Architecture and Biomass in the Panicoid Grass, Setaria.
Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.
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Who cites it
32 citing papers in PubMed.
- Genome-wide association analysis and candidate gene identification for plant height in Shanxi local foxtail millet varieties.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Analysis of Genetic Variation of Rice Straw Characteristics and Its Influence on Biomass.Plant direct · 2026Article
- Harnessing Setaria as a Model for CPlants (Basel, Switzerland) · 2025Review
- Comparative transcriptome analysis and genetic dissection of vegetative branching traits in foxtail millet (Setaria italica).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Crop Evolution of Foxtail Millet.Plants (Basel, Switzerland) · 2024Review
- Mapping of dynamic quantitative trait loci for plant height in a RIL population of foxtail millet (Frontiers in plant science · 2024Article
- Alterations in Growth Habit to Channel End-of-Season Perennial Reserves towards Increased Yield and Reduced Regrowth after Defoliation in Upland Cotton (International journal of molecular sciences · 2023Article
- Multiple-model GWAS identifies optimal allelic combinations of quantitative trait loci for malic acid in tomato.Horticulture research · 2023Article
- Genome-wide identification of quantitative trait loci for morpho-agronomic and yield-related traits in foxtail millet (Setaria italica) across multi-environments.Molecular genetics and genomics : MGG · 2022Article
- Recombinant inbred lines and next-generation sequencing enable rapid identification of candidate genes involved in morphological and agronomic traits in foxtail millet.Scientific reports · 2022Article
- Multi-omics intervention inFrontiers in plant science · 2022Review
- Fine mapping ofMolecular breeding : new strategies in plant improvement · 2021Article
- What Traits Should Be Measured for Biomass in Kenaf?Plants (Basel, Switzerland) · 2021Article
- Correlation and co-localization of QTL for stomatal density, canopy temperature, and productivity with and without drought stress in Setaria.Journal of experimental botany · 2021Article
- High-depth resequencing of 312 accessions reveals the local adaptation of foxtail millet.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Population genomic structure of Eurasian and African foxtail millet landrace accessions inferred from genotyping-by-sequencing.The plant genome · 2021Article
- Integration of high-density genetic mapping with transcriptome analysis uncovers numerous agronomic QTL and reveals candidate genes for the control of tillering in sorghum.G3 (Bethesda, Md.) · 2021Article
- QTG-Finder2: A Generalized Machine-Learning Algorithm for Prioritizing QTL Causal Genes in Plants.G3 (Bethesda, Md.) · 2020Article
- Genomics-assisted breeding in minor and pseudo-cereals.Breeding science · 2020Article
- Molecular Dissection of Quantitative Variation in Bermudagrass Hybrids (G3 (Bethesda, Md.) · 2019Article
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2 authors.
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Abstract
The architecture of a plant affects its ability to compete for light and to respond to environmental stresses, thus affecting overall fitness and productivity. Two components of architecture, branching and height, were studied in 182 F7 recombinant inbred lines (RILs) at the vegetative, flowering and mature developmental stages in the panicoid C4 model grass system, Setaria. The RIL population was derived from a cross between domesticated S. italica (foxtail millet) and its wild relative S. viridis (green foxtail). In both field and greenhouse trials the wild parent was taller initially, started branching earlier, and flowered earlier, while the domesticated parent was shorter initially, but flowered later, producing a robust tall plant architecture with more nodes and leaves on the main culm and few or no branches. Biomass was highly correlated with height of the plant and number of nodes on the main culm, and generally showed a negative relationship with branch number. However, several of the RILs with the highest biomass in both trials were significantly more branched than the domesticated parent of the cross. Quantitative trait loci (QTL) analyses indicate that both height and branching are controlled by multiple genetic regions, often with QTL for both traits colocalizing in the same genomic regions. Genomic positions of several QTL colocalize with QTL in syntenic regions in other species and contain genes known to control branching and height in sorghum, maize, and switchgrass. Included in these is the ortholog of the rice SD-1 semi-dwarfing gene, which underlies one of the major Setaria height QTL. Understanding the relationships between height and branching patterns in Setaria, and their genetic control, is an important step to gaining a comprehensive knowledge of the development and genetic regulation of panicoid grass architecture.
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