Evidence map›Paper›PMID 26984500›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Viral serine palmitoyltransferase induces metabolic switch in sphingolipid biosynthesis and is required for infection of a marine alga.

Carmit Ziv, Sergey Malitsky, Alaa Othman, Shifra Ben-Dor, Yu Wei, Shuning Zheng, Asaph Aharoni, Thorsten Hornemann, Assaf Vardi

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
9.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
  3. Soil viral-host interactions regulate microplastic-dependent carbon storage.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  4. Review
  5. Article
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  9. Review
  10. Lipid biomarkers for algal resistance to viral infection in the ocean.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 3 countries.

Carmit ZivDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 76100, Israel;
Sergey MalitskyDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 76100, Israel;
Alaa OthmanInstitute for Clinical Chemistry, University Hospital Zurich, 8091 Zurich, Switzerland; Institute of Experimental and Clinical Pharmacology and Toxicology, University of Lübeck, 23562 Lübeck, Germany;ORCID http://orcid.org/0000-0002-0092-5594
Shifra Ben-DorBiological Services Unit, Weizmann Institute of Science, Rehovot 76100, Israel.
Yu WeiInstitute for Clinical Chemistry, University Hospital Zurich, 8091 Zurich, Switzerland;
Shuning ZhengDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 76100, Israel;
Asaph AharoniDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 76100, Israel;
Thorsten HornemannInstitute for Clinical Chemistry, University Hospital Zurich, 8091 Zurich, Switzerland;ORCID http://orcid.org/0000-0002-4218-1087
Assaf VardiDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 76100, Israel; assaf.vardi@weizmann.ac.il.
Weizmann Institute of Science · ILUniversity Hospital of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Marine viruses are the most abundant biological entities in the oceans shaping community structure and nutrient cycling. The interaction between the bloom-forming alga Emiliania huxleyi and its specific large dsDNA virus (EhV) is a major factor determining the fate of carbon in the ocean, thus serving as a key host-pathogen model system. The EhV genome encodes for a set of genes involved in the de novo sphingolipid biosynthesis, not reported in any viral genome to date. We combined detailed lipidomic and biochemical analyses to characterize the functional role of this virus-encoded pathway during lytic viral infection. We identified a major metabolic shift, mediated by differential substrate specificity of virus-encoded serine palmitoyltransferase, a key enzyme of sphingolipid biosynthesis. Consequently, unique viral glycosphingolipids, composed of unusual hydroxylated C17 sphingoid bases (t17:0) were highly enriched in the infected cells, and their synthesis was found to be essential for viral assembly. These findings uncover the biochemical bases of the virus-induced metabolic rewiring of the host sphingolipid biosynthesis during the chemical "arms race" in the ocean.

Indexed as

DNA VirusesEutrophicationGene Expression Regulation, ViralGlycosphingolipidsHaptophytaHost-Pathogen InteractionsHydroxylationPlant DiseasesSerine C-PalmitoyltransferaseSphingolipidsViral ProteinsGlycosphingolipidsSerine C-PalmitoyltransferaseSphingolipidsViral Proteinsalgal bloomsEmiliania huxelyimarine virusesserine palmitoyltransferasesphingolipids

Identifiers

PMID26984500
PMCPMC4822627
OpenAlexW2296778984

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.