Evidence map›Paper›PMID 26981695›Full record

ArticleZebrafish2016

Genomic Organization Under Different Environmental Conditions: Hoplosternum Littorale as a Model.

Francijara Araújo da Silva, Carlos Henrique Schneider, Eliana Feldberg, Fabricio Beggiato Baccaro, Natália Dayane Moura Carvalho, Maria Claudia Gross

Abstract read
In one paragraph

Article in Zebrafish, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Francijara Araújo da Silva1 Laboratório de Citogenômica Animal, Instituto de Ciências Biológicas , Universidade Federal do Amazonas, Manaus, Brazil .
Carlos Henrique Schneider1 Laboratório de Citogenômica Animal, Instituto de Ciências Biológicas , Universidade Federal do Amazonas, Manaus, Brazil .
Eliana Feldberg2 Laboratório de Genética Animal, Instituto Nacional de Pesquisas da Amazônia , Manaus, Brazil .
Fabricio Beggiato Baccaro3 Laboratório de Zoologia, Instituto de Ciências Biológicas, Universidade Federal do Amazonas , Manaus, Brazil .
Natália Dayane Moura Carvalho1 Laboratório de Citogenômica Animal, Instituto de Ciências Biológicas , Universidade Federal do Amazonas, Manaus, Brazil .
Maria Claudia Gross1 Laboratório de Citogenômica Animal, Instituto de Ciências Biológicas , Universidade Federal do Amazonas, Manaus, Brazil .

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Amazon has abundant rivers, streams, and floodplains in both polluted and nonpolluted environments, which show great adaptability. Thus, the goal of this study was to map repetitive DNA sequences in both mitotic chromosomes and erythrocyte micronuclei of tamoatás from polluted and nonpolluted environments and to assess the possible genotoxic effects of these environments. Individuals were collected in Manaus, Amazonas (AM), and submitted to classical and molecular cytogenetic techniques, as well as to a blood micronucleus test. Diploid number equal to 60 chromosomes are present in all individuals, with 18S ribosomal DNA sites present in one chromosome pair and no interstitial telomeric sites on chromosomes. The micronucleus test showed no significant differences in pairwise comparisons between environments or collection sites, but the Rex3 retroelement was dispersed on the chromosomes of individuals from unpolluted environments and compartmentalized in individuals from polluted environments. Divergent numbers of 5S rDNA sites are present in individuals from unpolluted and polluted environments. The mapping of repetitive sequences revealed that micronuclei have different compositions both intra- and interindividually that suggests different regions are lost in the formation of micronuclei, and no single fragile region undergoes breaks, although repetitive DNA elements are involved in this process.

Indexed as

EcosystemGenomicsAnimalsCatfishesChromosome MappingDNA, RibosomalEpigenesis, GeneticMitosisRiversRNA, Ribosomal, 18SRNA, Ribosomal, 5SDNA, RibosomalRNA, Ribosomal, 18SRNA, Ribosomal, 5S

Identifiers

PMID26981695
PMCPMC4892195

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.