Evidence map›Paper›PMID 26981389›Full record

ArticleGenomics data2016

Metagenomic data of fungal internal transcribed spacer from serofluid dish, a traditional Chinese fermented food.

Peng Chen, Yang Zhao, Zhengrong Wu, Ronghui Liu, Ruixiang Xu, Lei Yan, Hongyu Li

Abstract read
In one paragraph

Article in Genomics data, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Peng ChenSchool of Pharmacy, Lanzhou University, Donggang West Road No. 199, Lanzhou 730020, PR China.
Yang ZhaoGansu Key Laboratory of Biomonitoring and Bioremediation for Environmental Pollution, Institute of Microbiology, School of Life Sciences, Lanzhou University, Tianshui Road No. 222, Lanzhou 730000, PR China.
Zhengrong WuSchool of Pharmacy, Lanzhou University, Donggang West Road No. 199, Lanzhou 730020, PR China.
Ronghui LiuGansu Key Laboratory of Biomonitoring and Bioremediation for Environmental Pollution, Institute of Microbiology, School of Life Sciences, Lanzhou University, Tianshui Road No. 222, Lanzhou 730000, PR China.
Ruixiang XuSchool of Pharmacy, Lanzhou University, Donggang West Road No. 199, Lanzhou 730020, PR China.
Lei YanCollege of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, PR China.
Hongyu LiSchool of Pharmacy, Lanzhou University, Donggang West Road No. 199, Lanzhou 730020, PR China; Gansu Key Laboratory of Biomonitoring and Bioremediation for Environmental Pollution, Institute of Microbiology, School of Life Sciences, Lanzhou University, Tianshui Road No. 222, Lanzhou 730000, PR China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Serofluid dish (or Jiangshui, in Chinese), a traditional food in the Chinese culture for thousands of years, is made from vegetables by fermentation. In this work, microorganism community of the fermented serofluid dish was investigated by the culture-independent method. The metagenomic data in this article contains the sequences of fungal internal transcribed spacer (ITS) regions of rRNA genes from 12 different serofluid dish samples. The metagenome comprised of 50,865 average raw reads with an average of 8,958,220 bp and G + C content is 45.62%. This is the first report on metagenomic data of fungal ITS from serofluid dish employing Illumina platform to profile the fungal communities of this little known fermented food from Gansu Province, China. The Metagenomic data of fungal internal transcribed spacer can be accessed at NCBI, SRA database accession no. SRP067411.

Indexed as

Cultivation-independentFungal ITSJiangshuiMicrobial diversitySerofluid dish

Identifiers

PMID26981389
PMCPMC4778662

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.