Evidence map›Paper›PMID 26980593›Full record

ArticleNature communications2016

Connecting two proteins using a fusion alpha helix stabilized by a chemical cross linker.

Woo Hyeon Jeong, Haerim Lee, Dong Hyun Song, Jae-Hoon Eom, Sun Chang Kim, Hee-Seung Lee, Hayyoung Lee, Jie-Oh Lee

Abstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Protein Stability: Enhancement and Measurement.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  10. Article
  11. Development of imaging scaffolds for cryo-electron microscopy.Current opinion in structural biology · 2020
    Review
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Woo Hyeon JeongDepartment of Chemistry, KAIST, Daejeon 34141, Korea.
Haerim LeeDepartment of Biological Sciences, KAIST, Daejeon 34141, Korea.
Dong Hyun SongAgency for Defense Development, Daejeon 34186, Korea.
Jae-Hoon EomDepartment of Chemistry, KAIST, Daejeon 34141, Korea.
Sun Chang KimDepartment of Biological Sciences, KAIST, Daejeon 34141, Korea.
Hee-Seung LeeDepartment of Chemistry, KAIST, Daejeon 34141, Korea.
Hayyoung LeeInstitute of Biotechnology, Chungnam National University, Daejeon 34134, Korea.
Jie-Oh LeeDepartment of Chemistry, KAIST, Daejeon 34141, Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Building a sophisticated protein nano-assembly requires a method for linking protein components in a predictable and stable structure. Most of the cross linkers available have flexible spacers. Because of this, the linked hybrids have significant structural flexibility and the relative structure between their two components is largely unpredictable. Here we describe a method of connecting two proteins via a 'fusion α helix' formed by joining two pre-existing helices into a single extended helix. Because simple ligation of two helices does not guarantee the formation of a continuous helix, we used EY-CBS, a synthetic cross linker that has been shown to react selectively with cysteines in α-helices, to stabilize the connecting helix. Formation and stabilization of the fusion helix was confirmed by determining the crystal structures of the fusion proteins with and without bound EY-CBS. Our method should be widely applicable for linking protein building blocks to generate predictable structures.

Indexed as

AnkyrinsCross-Linking ReagentsCrystallizationCrystallography, X-RayCysteinePeptide FragmentsProtein Structure, SecondaryStaphylococcal Protein AAnkyrinsCross-Linking ReagentsCysteinePeptide FragmentsStaphylococcal Protein A

Identifiers

PMID26980593
PMCPMC4799363

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.