Evidence map›Paper›PMID 26980281›Full record

ArticleNucleic acids research2016

Oxidized dNTPs and the OGG1 and MUTYH DNA glycosylases combine to induce CAG/CTG repeat instability.

Piera Cilli, Ilenia Ventura, Anna Minoprio, Ettore Meccia, Alberto Martire, Samuel H Wilson, Margherita Bignami, Filomena Mazzei

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
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  6. Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. MUTYH: Not just polyposis.World journal of clinical oncology · 2020
    Review
  14. Article
  15. Of Men and Mice: Modeling the Fragile X Syndrome.Frontiers in molecular neuroscience · 2018
    Article
  16. Article
  17. Disease onset in X-linked dystonia-parkinsonism correlates with expansion of a hexameric repeat within an SVA retrotransposon inProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Piera CilliDepartment of Environment and Primary Prevention, Istituto Superiore di Sanità, 00161 Roma, Italy Department of Science, University Roma Tre, 00154 Roma, Italy.
Ilenia VenturaDepartment of Environment and Primary Prevention, Istituto Superiore di Sanità, 00161 Roma, Italy.
Anna MinoprioDepartment of Environment and Primary Prevention, Istituto Superiore di Sanità, 00161 Roma, Italy.
Ettore MecciaDepartment of Environment and Primary Prevention, Istituto Superiore di Sanità, 00161 Roma, Italy.
Alberto MartireDepartment of Drug Safety and Evaluation, Istituto Superiore di Sanità, 00161 Roma, Italy.
Samuel H WilsonGenome Integrity and Structural Biology Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC 27709, USA.
Margherita BignamiDepartment of Environment and Primary Prevention, Istituto Superiore di Sanità, 00161 Roma, Italy Margherita.bignami@gmail.com.
Filomena MazzeiDepartment of Environment and Primary Prevention, Istituto Superiore di Sanità, 00161 Roma, Italy filomena.mazzei@iss.it.
Istituto Superiore di Sanità · ITNational Institute of Environmental Health Sciences · USRoma Tre University · IT

Funding

Mechanisms of Nucleic Acid Enzymes - Pol Beta, HIV-1 Reverse Transcriptase and Mammalian Base Repair EnzymesZIAES050158 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WILSON, SAMUEL H · 2009 to 2022
$17.0M
BIOLOGY OF MAMMALIAN BASE EXCISION REPAIRZ01ES050159 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WILSON, SAMUEL H · 1997 to 2008
$4.5M
Nucleic Acid Enzymes--Pol Beta And Base Repair EnzymesZ01ES050158 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WILSON, SAMUEL H · 1997 to 2008
$2.8M
NIEHS NIH HHS Z01 ES050158NIEHS NIH HHS Z01 ES050159
6 · The paper itself

Abstract

DNA trinucleotide repeat (TNR) expansion underlies several neurodegenerative disorders including Huntington's disease (HD). Accumulation of oxidized DNA bases and their inefficient processing by base excision repair (BER) are among the factors suggested to contribute to TNR expansion. In this study, we have examined whether oxidation of the purine dNTPs in the dNTP pool provides a source of DNA damage that promotes TNR expansion. We demonstrate that during BER of 8-oxoguanine (8-oxodG) in TNR sequences, DNA polymerase β (POL β) can incorporate 8-oxodGMP with the formation of 8-oxodG:C and 8-oxodG:A mispairs. Their processing by the OGG1 and MUTYH DNA glycosylases generates closely spaced incisions on opposite DNA strands that are permissive for TNR expansion. Evidence in HD model R6/2 mice indicates that these DNA glycosylases are present in brain areas affected by neurodegeneration. Consistent with prevailing oxidative stress, the same brain areas contained increased DNA 8-oxodG levels and expression of the p53-inducible ribonucleotide reductase. Our in vitro and in vivo data support a model where an oxidized dNTPs pool together with aberrant BER processing contribute to TNR expansion in non-replicating cells.

Indexed as

Genomic InstabilityTrinucleotide Repeats8-Hydroxy-2'-DeoxyguanosineAnimalsDeoxyguanosineDNADNA GlycosylasesDNA Polymerase betaDNA RepairFemaleHumansMaleMiceMice, TransgenicModels, BiologicalOxidation-Reduction8-Hydroxy-2'-DeoxyguanosineDeoxyguanosineDNADNA GlycosylasesDNA Polymerase betamutY adenine glycosylaseoxoguanine glycosylase 1, human

Identifiers

PMID26980281
PMCPMC4914090
OpenAlexW2300010738

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.