Evidence map›Paper›PMID 26980148›Full record

ArticleScientific reports2016

Mechanism and inhibition of human UDP-GlcNAc 2-epimerase, the key enzyme in sialic acid biosynthesis.

Sheng-Chia Chen, Chi-Hung Huang, Shu-Jung Lai, Chia Shin Yang, Tzu-Hung Hsiao, Ching-Heng Lin, Pin-Kuei Fu, Tzu-Ping Ko, Yeh Chen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 43 citations in OpenAlex.

  1. Preclinical assessment of GNEFuture science OA · 2026
    Article
  2. Article
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  5. [Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2025
    Review
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  19. The Many Ways by WhichMolecules (Basel, Switzerland) · 2018
    Review
  20. GNE Myopathy: Etiology, Diagnosis, and Therapeutic Challenges.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Sheng-Chia ChenDepartment of Biotechnology, Hungkuang University, Taichung, Taiwan.
Chi-Hung HuangDepartment of Biotechnology, Hungkuang University, Taichung, Taiwan.
Shu-Jung LaiInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Chia Shin YangDepartment of Biotechnology, Hungkuang University, Taichung, Taiwan.
Tzu-Hung HsiaoDepartment of Medical Research, Taichung Veterans General Hospital, Taichung, Taiwan.
Ching-Heng LinDepartment of Medical Research, Taichung Veterans General Hospital, Taichung, Taiwan.
Pin-Kuei FuDivision of Critical Care &Respiratory Therapy, Department of Internal Medicine, Taichung Veterans General Hospital, Taichung, Taiwan.
Tzu-Ping KoInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Yeh ChenDepartment of Biotechnology, Hungkuang University, Taichung, Taiwan.
Hungkuang University · TWTaichung Veterans General Hospital · TWInstitute of Biological Chemistry, Academia Sinica · TWScinoPharm Taiwan (Taiwan) · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The bifunctional enzyme UDP-GlcNAc 2-epimerase/ManNAc kinase (GNE) plays a key role in sialic acid production. It is different from the non-hydrolyzing enzymes for bacterial cell wall biosynthesis, and it is feed-back inhibited by the downstream product CMP-Neu5Ac. Here the complex crystal structure of the N-terminal epimerase part of human GNE shows a tetramer in which UDP binds to the active site and CMP-Neu5Ac binds to the dimer-dimer interface. The enzyme is locked in a tightly closed conformation. By comparing the UDP-binding modes of the non-hydrolyzing and hydrolyzing UDP-GlcNAc epimerases, we propose a possible explanation for the mechanistic difference. While the epimerization reactions of both enzymes are similar, Arg113 and Ser302 of GNE are likely involved in product hydrolysis. On the other hand, the CMP-Neu5Ac binding mode clearly elucidates why mutations in Arg263 and Arg266 can cause sialuria. Moreover, full-length modelling suggests a channel for ManNAc trafficking within the bifunctional enzyme.

Indexed as

Allosteric RegulationAmino Acid SequenceCarbohydrate EpimerasesCatalytic DomainConserved SequenceCrystallography, X-RayCytidine MonophosphateEnzyme InhibitorsHumansHydrogen BondingHydrolysisKineticsModels, MolecularN-Acetylneuraminic AcidProtein BindingProtein Structure, QuaternaryCarbohydrate Epimerasescytidine-5'-monophosphosialic acidCytidine MonophosphateEnzyme InhibitorsN-Acetylneuraminic AcidSialic AcidsUDP acetylglucosamine-2-epimeraseUridine Diphosphate

Identifiers

PMID26980148
PMCPMC4793188
OpenAlexW2300584298

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.