Evidence map›Paper›PMID 26978658›Full record

ArticlePloS one2016

Genetic Diversity of NHE1, Receptor for Subgroup J Avian Leukosis Virus, in Domestic Chicken and Wild Anseriform Species.

Markéta Reinišová, Jiří Plachý, Dana Kučerová, Filip Šenigl, Michal Vinkler, Jiří Hejnar

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
  3. Avian Leukosis: Will We Be Able to Get Rid of It?Animals : an open access journal from MDPI · 2023
    Review
  4. Advances on genetic and genomic studies of ALV resistance.Journal of animal science and biotechnology · 2022
    Review
  5. Article
  6. Article
  7. Article
  8. Precise CRISPR/Cas9 editing of the NHE1 gene renders chickens resistant to the J subgroup of avian leukosis virus.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Markéta ReinišováInstitute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, CZ-14220, Prague 4, Czech Republic.
Jiří PlachýInstitute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, CZ-14220, Prague 4, Czech Republic.
Dana KučerováInstitute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, CZ-14220, Prague 4, Czech Republic.
Filip ŠeniglInstitute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, CZ-14220, Prague 4, Czech Republic.
Michal VinklerCharles University in Prague, Faculty of Science, Department of Zoology, Vinicna 7, CZ-12844, Prague 2, Czech Republic.
Jiří HejnarInstitute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, CZ-14220, Prague 4, Czech Republic.
Czech Academy of Sciences · CZCzech Academy of Sciences, Institute of Molecular Genetics · CZCharles University · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

J subgroup avian leukosis virus (ALV-J) infects domestic chicken, jungle fowl, and turkey and enters the host cell through a receptor encoded by tvj locus and identified as Na+/H+ exchanger 1 (NHE1). The resistance to ALV-J in a great majority of examined galliform species was explained by deletions or substitutions of the critical tryptophan 38 in the first extracellular loop of NHE1, and genetic polymorphisms around this site predict the susceptibility or resistance of a given species or individual. In this study, we examined the NHE1 polymorphism in domestic chicken breeds and documented quantitative differences in their susceptibility to ALV-J in vitro. In a panel of chicken breeds assembled with the aim to cover the maximum variability encountered in domestic chickens, we found a completely uniform sequence of NHE1 extracellular loop 1 (ECL1) without any source of genetic variation for the selection of ALV-J-resistant poultry. In parallel, we studied the natural polymorphisms of NHE1 in wild ducks and geese because of recent reports on ALV-J positivity in feral Asian species. In anseriform species, we demonstrate a specific and highly conserved critical ECL1 sequence without any homologue of tryptophan 38 in accordance with the resistance of duck cells to prototype ALV-J. Last, we demonstrated that the new Asian strains of ALV-J have not evolved their envelope glycoprotein to the entry the duck cells. Our results contribute substantially to the current discussion of possible heterotransmission of ALV-J and its spill-over into the wild ducks and geese.

Indexed as

Animals, DomesticAnimals, WildGenetic VariationAmino Acid SequenceAnimalsCells, CulturedChick EmbryoChickensMolecular Sequence DataSequence Homology, Amino AcidSodium-Hydrogen ExchangersSodium-Hydrogen Exchangers

Identifiers

PMID26978658
PMCPMC4792377
OpenAlexW2299140542

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.