ArticlePloS one2016
Development of Microsatellite Markers and Analysis of Genetic Diversity and Population Structure of Colletotrichum gloeosporioides from Ethiopia.
Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- Microsatellite Markers Display High Diversity in Bean Anthracnose Pathogen Colletotrichum lindemuthianum in Kashmir.Biochemical genetics · 2026Article
- Spatiotemporal analysis of the structure and genetic diversity ofFrontiers in microbiology · 2025Article
- Morphological and genetic characterization of jackfruit (Artocarpus heterophyllus) in the Kayunga and Luwero districts of Uganda.BMC plant biology · 2024Article
- Population Genetic Structure of the Bean Leaf BeetleInsects · 2022Article
- Structured Framework and Genome Analysis ofJournal of fungi (Basel, Switzerland) · 2022Article
- Hybrid de novo genome-reassembly reveals new insights on pathways and pathogenicity determinants in rice blast pathogen Magnaporthe oryzae RMg_Dl.Scientific reports · 2021Article
- Genetic Diversity and Population Structure ofJournal of fungi (Basel, Switzerland) · 2021Article
- A Concise Review ofPlants (Basel, Switzerland) · 2021Review
- Fungal Genomic Resources for Strain Identification and Diversity Analysis of 1900 Fungal Species.Journal of fungi (Basel, Switzerland) · 2021Article
- Eighty years of gene-for-gene relationship and its applications in identification and utilization ofJournal of genetics · 2021Review
- Article
- Genetic Diversity Assessment of MPOB-Senegal Oil Palm Germplasm Using Microsatellite Markers.BioMed research international · 2021Article
- Identification of Novel Microsatellite Markers to Assess the Population Structure and Genetic Differentiation ofFrontiers in microbiology · 2019Article
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- High species diversity inPersoonia · 2017Article
- Draft whole genome sequence of groundnut stem rot fungus Athelia rolfsii revealing genetic architect of its pathogenicity and virulence.Scientific reports · 2017Article
- Analysis of the Fungal Diversity in Citrus Leaves with Greasy Spot Disease Symptoms.Microbial ecology · 2017Article
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Authors and funding
7 authors.
Funding
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Abstract
Twenty three polymorphic microsatellite markers were developed for citrus plant pathogenic fungus, Colletotrichum gloeosporioides, and were used to analyze genetic diversity and population structure of 163 isolates from four different geographical regions of Ethiopia. These loci produced a total of 118 alleles with an average of 5.13 alleles per microsatellite marker. The polymorphic information content values ranged from 0.104 to 0.597 with an average of 0.371. The average observed heterozygosity across all loci varied from 0.046 to 0.058. The gene diversity among the loci ranged from 0.106 to 0.664. Unweighted Neighbor-joining and population structure analysis grouped these 163 isolates into three major groups. The clusters were not according to the geographic origin of the isolates. Analysis of molecular variance showed 85% of the total variation within populations and only 5% among populations. There was low genetic differentiation in the total populations (FST = 0.049) as evidenced by high level of gene flow estimate (Nm = 4.8 per generation) among populations. The results show that Ethiopian C. gloeosporioides populations are generally characterized by a low level of genetic diversity. The newly developed microsatellite markers were useful in analyzing the genetic diversity and population structure of the C. gloeosporioides populations. Information obtained from this study could be useful as a base to design strategies for better management of leaf and fruit spot disease of citrus in Ethiopia.
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