Evidence map›Paper›PMID 26978070›Full record

ArticlePloS one2016

Plant Tandem CCCH Zinc Finger Proteins Interact with ABA, Drought, and Stress Response Regulators in Processing-Bodies and Stress Granules.

Srimathi Bogamuwa, Jyan-Chyun Jang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
10.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 62 citations in OpenAlex.

  1. Review
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  9. International journal of molecular sciences · 2024
    Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Interactome of Arabidopsis Thaliana.Plants (Basel, Switzerland) · 2022
    Article
  16. Transcriptome Analysis ofFrontiers in genetics · 2022
    Article
  17. Review
  18. Article
  19. Review
  20. The Roles of CCCH Zinc-Finger Proteins in Plant Abiotic Stress Tolerance.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Srimathi BogamuwaDepartment of Horticulture and Crop Science, The Ohio State University, Columbus, Ohio, United States of America.
Jyan-Chyun JangDepartment of Horticulture and Crop Science, The Ohio State University, Columbus, Ohio, United States of America.
The Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although multiple lines of evidence have indicated that Arabidopsis thaliana Tandem CCCH Zinc Finger proteins, AtTZF4, 5 and 6 are involved in ABA, GA and phytochrome mediated seed germination responses, the interacting proteins involved in these processes are unknown. Using yeast two-hybrid screens, we have identified 35 putative AtTZF5 interacting protein partners. Among them, Mediator of ABA-Regulated Dormancy 1 (MARD1) is highly expressed in seeds and involved in ABA signal transduction, while Responsive to Dehydration 21A (RD21A) is a well-documented stress responsive protein. Co-immunoprecipitation (Co-IP) and bimolecular fluorescence complementation (BiFC) assays were used to confirm that AtTZF5 can interact with MARD1 and RD21A in plant cells, and the interaction is mediated through TZF motif. In addition, AtTZF4 and 6 could also interact with MARD1 and RD21A in Y-2-H and BiFC assay, respectively. The protein-protein interactions apparently take place in processing bodies (PBs) and stress granules (SGs), because AtTZF5, MARD1 and RD21A could interact and co-localize with each other and they all can co-localize with the same PB and SG markers in plant cells.

Indexed as

Abscisic AcidArabidopsisArabidopsis ProteinsCarrier ProteinsCysteine ProteasesDehydrationDroughtsGene Expression Regulation, PlantGenes, ReporterGenetic VectorsImmunoprecipitationMicroscopy, FluorescenceOrganellesPeptide FragmentsProtein Interaction MappingProtoplastsAbscisic AcidArabidopsis ProteinsAt5g07500 protein, ArabidopsisCarrier ProteinsCysteine ProteasesMARD1 protein, ArabidopsisPeptide FragmentsRD21 protein, ArabidopsisRecombinant Fusion ProteinsRNA, PlantTranscription FactorsTZF4 protein, ArabidopsisTZF5 protein, Arabidopsis

Identifiers

PMID26978070
PMCPMC4792416
OpenAlexW2301226206

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.