Evidence map›Paper›PMID 26977345›Full record

ArticleBiomedical optics express2016

Wide field-of-view fluorescence image deconvolution with aberration-estimation from Fourier ptychography.

Jaebum Chung, Jinho Kim, Xiaoze Ou, Roarke Horstmeyer, Changhuei Yang

Abstract read
In one paragraph

Article in Biomedical optics express, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Motion-corrected Fourier ptychography.Biomedical optics express · 2016
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jaebum ChungDepartment of Electrical Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Jinho KimDepartment of Electrical Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Xiaoze OuDepartment of Electrical Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Roarke HorstmeyerDepartment of Electrical Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Changhuei YangDepartment of Electrical Engineering, California Institute of Technology, Pasadena, CA 91125, USA.

Funding

Multiplex fluorescence optofluidic microscopy for diagnosis of enteric parasitesR01AI096226 · NIAID · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI YANG, CHANGHUEI · 2011 to 2015
$5.8M
NIAID NIH HHS R01 AI096226
6 · The paper itself

Abstract

This paper presents a method to simultaneously acquire an aberration-corrected, wide field-of-view fluorescence image and a high-resolution coherent bright-field image using a computational microscopy method. First, the procedure applies Fourier ptychographic microscopy (FPM) to retrieve the amplitude and phase of a sample, at a resolution that significantly exceeds the cutoff spatial frequency of the microscope objective lens. At the same time, redundancy within the set of acquired FPM bright-field images offers a means to estimate microscope aberrations. Second, the procedure acquires an aberrated fluorescence image, and computationally improves its resolution through deconvolution with the estimated aberration map. An experimental demonstration successfully improves the bright-field resolution of fixed, stained and fluorescently tagged HeLa cells by a factor of 4.9, and reduces the error caused by aberrations in a fluorescence image by up to 31%, over a field of view of 6.2 mm by 9.3 mm. For optimal deconvolution, we show the fluorescence image needs to have a signal-to-noise ratio of at least ~18.

Indexed as

(070.0070) Fourier optics and signal processing(180.2520) Fluorescence microscopy

Identifiers

PMID26977345
PMCPMC4771454

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.