Evidence map›Paper›PMID 26977085›Full record

ArticleThe Plant cell2016

Functionally Similar WRKY Proteins Regulate Vacuolar Acidification in Petunia and Hair Development in Arabidopsis.

Walter Verweij, Cornelis E Spelt, Mattijs Bliek, Michel de Vries, Niek Wit, Marianna Faraco, Ronald Koes, Francesca M Quattrocchio

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 160 citations in OpenAlex.

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  16. Genome-Wide Identification and Characterization of theEvolutionary bioinformatics online · 2025
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22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Walter VerweijDepartment of Molecular and Cell Biology, VU University, 1071 HK Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0001-8310-9068
Cornelis E SpeltDepartment of Molecular and Cell Biology, VU University, 1071 HK Amsterdam, The Netherlands Swammerdam Institute for Life Sciences, University of Amsterdam, 1012 WX Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0001-8012-2291
Mattijs BliekDepartment of Molecular and Cell Biology, VU University, 1071 HK Amsterdam, The Netherlands Swammerdam Institute for Life Sciences, University of Amsterdam, 1012 WX Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0002-0488-4873
Michel de VriesDepartment of Molecular and Cell Biology, VU University, 1071 HK Amsterdam, The Netherlands.
Niek WitDepartment of Molecular and Cell Biology, VU University, 1071 HK Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0001-7441-5995
Marianna FaracoDepartment of Molecular and Cell Biology, VU University, 1071 HK Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0002-6537-9926
Ronald KoesDepartment of Molecular and Cell Biology, VU University, 1071 HK Amsterdam, The Netherlands Swammerdam Institute for Life Sciences, University of Amsterdam, 1012 WX Amsterdam, The Netherlands ronald.koes@uva.nl.ORCID http://orcid.org/0000-0003-3793-5072
Francesca M QuattrocchioDepartment of Molecular and Cell Biology, VU University, 1071 HK Amsterdam, The Netherlands Swammerdam Institute for Life Sciences, University of Amsterdam, 1012 WX Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0001-8040-4061
Netherlands Institute for Neuroscience · NLVrije Universiteit Amsterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The WD40 proteins ANTHOCYANIN11 (AN11) from petunia (Petunia hybrida) and TRANSPARENT TESTA GLABRA1 (TTG1) from Arabidopsis thaliana and associated basic helix-loop-helix (bHLH) and MYB transcription factors activate a variety of differentiation processes. In petunia petals, AN11 and the bHLH protein AN1 activate, together with the MYB protein AN2, anthocyanin biosynthesis and, together with the MYB protein PH4, distinct genes, such as PH1 and PH5, that acidify the vacuole. To understand how AN1 and AN11 activate anthocyanin biosynthetic and PH genes independently, we isolated PH3. We found that PH3 is a target gene of the AN11-AN1-PH4 complex and encodes a WRKY protein that can bind to AN11 and is required, in a feed-forward loop, together with AN11-AN1-PH4 for transcription of PH5. PH3 is highly similar to TTG2, which regulates hair development, tannin accumulation, and mucilage production in Arabidopsis. Like PH3, TTG2 can bind to petunia AN11 and the Arabidopsis homolog TTG1, complement ph3 in petunia, and reactivate the PH3 target gene PH5. Our findings show that the specificity of WD40-bHLH-MYB complexes is in part determined by interacting proteins, such as PH3 and TTG2, and reveal an unanticipated similarity in the regulatory circuitry that controls petunia vacuolar acidification and Arabidopsis hair development.

Indexed as

AnthocyaninsArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsFlowersGene Expression Regulation, PlantGene Regulatory NetworksHomeostasisHydrogen-Ion ConcentrationPetuniaPhylogenyPlant ProteinsPlants, Genetically ModifiedVacuolesAN11 protein, Petunia x hybridaAnthocyaninsArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsPlant ProteinsTTG1 protein, Arabidopsis

Identifiers

PMID26977085
PMCPMC4826004
OpenAlexW2298569907

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.