Evidence map›Paper›PMID 26977067›Full record

ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2016

Towards a morphological metric of assemblage dynamics in the fossil record: a test case using planktonic foraminifera.

Allison Y Hsiang, Leanne E Elder, Pincelli M Hull

Abstract read
In one paragraph

Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Biodiversity-ecosystem functioning relationships in long-term time series and palaeoecological records: deep sea as a test bed.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016
    Article
  7. The challenges to inferring the regulators of biodiversity in deep time.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016
    Article
  8. The impact of Cenozoic cooling on assemblage diversity in planktonic foraminifera.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Allison Y HsiangDepartment of Geology and Geophysics, Yale University, P.O. Box 208109, New Haven, CT 06520-8109, USA.
Leanne E ElderDepartment of Geology and Geophysics, Yale University, P.O. Box 208109, New Haven, CT 06520-8109, USA.
Pincelli M HullDepartment of Geology and Geophysics, Yale University, P.O. Box 208109, New Haven, CT 06520-8109, USA pincelli.hull@yale.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

With a glance, even the novice naturalist can tell you something about the ecology of a given ecosystem. This is because the morphology of individuals reflects their evolutionary history and ecology, and imparts a distinct 'look' to communities--making it possible to immediately discern between deserts and forests, or coral reefs and abyssal plains. Once quantified, morphology can provide a common metric for characterizing communities across space and time and, if measured rapidly, serve as a powerful tool for quantifying biotic dynamics. Here, we present and test a new high-throughput approach for analysing community shape in the fossil record using semi-three-dimensional (3D) morphometrics from vertically stacked images (light microscopic or photogrammetric). We assess the potential informativeness of community morphology in a first analysis of the relationship between 3D morphology, ecology and phylogeny in 16 extant species of planktonic foraminifera--an abundant group in the marine fossil record--and in a preliminary comparison of four assemblages from the North Atlantic. In the species examined, phylogenetic relatedness was most closely correlated with ecology, with all three ecological traits examined (depth habitat, symbiont ecology and biogeography) showing significant phylogenetic signal. By contrast, morphological trees (based on 3D shape similarity) were relatively distantly related to both ecology and phylogeny. Although improvements are needed to realize the full utility of community morphometrics, our approach already provides robust volumetric measurements of assemblage size, a key ecological characteristic.

Indexed as

Biological EvolutionFossilsModels, BiologicalPlanktonAnimal DistributionAtlantic OceanCluster AnalysisEcosystemForaminiferaPopulation Dynamicsautomated three-dimensional morphometricscommunity ecologycommunity morphopologymacroecologyplanktonic foraminiferavirtual palaeontology

Identifiers

PMID26977067
PMCPMC4810820

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.