Evidence map›Paper›PMID 26976262›Full record

ArticleScientific reports2016

A Stress-Activated Transposon in Arabidopsis Induces Transgenerational Abscisic Acid Insensitivity.

Hidetaka Ito, Jong-Myong Kim, Wataru Matsunaga, Hidetoshi Saze, Akihiro Matsui, Takaho A Endo, Yoshiko Harukawa, Hiroki Takagi, Hiroki Yaegashi, Yukari Masuta and 9 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
30.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 115 citations in OpenAlex.

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  8. Exploring Genetic Diversity and Inter-/Intraspecific Polymorphism inInternational journal of molecular sciences · 2025
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  9. Climate change and plant genomic plasticity.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 1 country.

Hidetaka ItoFaculty of Science, Hokkaido University, Sapporo 060-0810, Japan.
Jong-Myong KimPlant Genomic Network Research Team, RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan.
Wataru MatsunagaFaculty of Science, Hokkaido University, Sapporo 060-0810, Japan.
Hidetoshi SazeOkinawa Institute of Science and Technology, Onna-son, 904-0495, Japan.
Akihiro MatsuiPlant Genomic Network Research Team, RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan.
Takaho A EndoRIKEN IMS-RCAI, Yokohama 230-0045, Japan.
Yoshiko HarukawaOkinawa Institute of Science and Technology, Onna-son, 904-0495, Japan.
Hiroki TakagiIwate Biotechnology Research Center, Kitakami 024-0003, Japan.
Hiroki YaegashiIwate Biotechnology Research Center, Kitakami 024-0003, Japan.
Yukari MasutaFaculty of Science, Hokkaido University, Sapporo 060-0810, Japan.
Seiji MasudaFaculty of Science, Hokkaido University, Sapporo 060-0810, Japan.
Junko IshidaPlant Genomic Network Research Team, RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan.
Maho TanakaPlant Genomic Network Research Team, RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan.
Satoshi TakahashiPlant Genomic Network Research Team, RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan.
Taeko MorosawaPlant Genomic Network Research Team, RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan.
Tetsuro ToyodaRIKEN Advanced Center for Computing and Communication, Wako 351-0198, Japan.
Tetsuji KakutaniNational Institute of Genetics, Mishima 411-8540, Japan.
Atsushi KatoFaculty of Science, Hokkaido University, Sapporo 060-0810, Japan.
Motoaki SekiPlant Genomic Network Research Team, RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan.
RIKEN Center for Sustainable Resource Science · JPHokkaido University · JPIwate Biotechnology Research Center · JPOkinawa Institute of Science and Technology Graduate University · JPJapan Science and Technology Agency · JPNational Institute of Genetics · JPRIKEN Center for Integrative Medical Sciences · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transposable elements (TEs), or transposons, play an important role in adaptation. TE insertion can affect host gene function and provides a mechanism for rapid increases in genetic diversity, particularly because many TEs respond to environmental stress. In the current study, we show that the transposition of a heat-activated retrotransposon, ONSEN, generated a mutation in an abscisic acid (ABA) responsive gene, resulting in an ABA-insensitive phenotype in Arabidopsis, suggesting stress tolerance. Our results provide direct evidence that a transposon activated by environmental stress could alter the genome in a potentially positive manner. Furthermore, the ABA-insensitive phenotype was inherited when the transcription was disrupted by an ONSEN insertion, whereas ABA sensitivity was recovered when the effects of ONSEN were masked by IBM2. These results suggest that epigenetic mechanisms in host plants typically buffered the effect of a new insertion, but could selectively "turn on" TEs when stressed.

Indexed as

RetroelementsAbscisic AcidAdaptation, PhysiologicalArabidopsisArabidopsis ProteinsDNA MethylationDNA, PlantGene Expression Regulation, PlantSodium ChlorideStress, PhysiologicalAbscisic AcidArabidopsis ProteinsDNA, PlantRetroelementsSodium Chloride

Identifiers

PMID26976262
PMCPMC4791638
OpenAlexW2300209738

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.