Evidence map›Paper›PMID 26973833›Full record

ArticleFrontiers in bioengineering and biotechnology2016

Structure, Function, and Propagation of Information across Living Two, Four, and Eight Node Degree Topologies.

Sankaraleengam Alagapan, Eric Franca, Liangbin Pan, Stathis Leondopulos, Bruce C Wheeler, Thomas B DeMarse

Abstract read
In one paragraph

Article in Frontiers in bioengineering and biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sankaraleengam AlagapanJ. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida , Gainesville, FL , USA.
Eric FrancaJ. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida , Gainesville, FL , USA.
Liangbin PanJ. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida , Gainesville, FL , USA.
Stathis LeondopulosJ. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida , Gainesville, FL , USA.
Bruce C WheelerJ. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, Gainesville, FL, USA; Department of Biomedical Engineering, University of California San Diego, San Diego, CA, USA.
Thomas B DeMarseJ. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, Gainesville, FL, USA; Department of Pediatric Neurology, University of Florida, Gainesville, FL, USA.

Funding

ENGINEERING FORM AND FUNCTION IN NEURONAL NETWORKSR01NS052233 · NINDS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI WHEELER, BRUCE C. · 2006 to 2016
$4.1M
6 · The paper itself

Abstract

In this study, we created four network topologies composed of living cortical neurons and compared resultant structural-functional dynamics including the nature and quality of information transmission. Each living network was composed of living cortical neurons and were created using microstamping of adhesion promoting molecules and each was "designed" with different levels of convergence embedded within each structure. Networks were cultured over a grid of electrodes that permitted detailed measurements of neural activity at each node in the network. Of the topologies we tested, the "Random" networks in which neurons connect based on their own intrinsic properties transmitted information embedded within their spike trains with higher fidelity relative to any other topology we tested. Within our patterned topologies in which we explicitly manipulated structure, the effect of convergence on fidelity was dependent on both topology and time-scale (rate vs. temporal coding). A more detailed examination using tools from network analysis revealed that these changes in fidelity were also associated with a number of other structural properties including a node's degree, degree-degree correlations, path length, and clustering coefficients. Whereas information transmission was apparent among nodes with few connections, the greatest transmission fidelity was achieved among the few nodes possessing the highest number of connections (high degree nodes or putative hubs). These results provide a unique view into the relationship between structure and its affect on transmission fidelity, at least within these small neural populations with defined network topology. They also highlight the potential role of tools such as microstamp printing and microelectrode array recordings to construct and record from arbitrary network topologies to provide a new direction in which to advance the study of structure-function relationships.

Indexed as

convergence–divergencecortical networksgraph theoryinformation transmissionstructure–function

Identifiers

PMID26973833
PMCPMC4770194

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.