Evidence map›Paper›PMID 26973696›Full record

ArticleFrontiers in plant science2016

Constitutive Negative Regulation of R Proteins in Arabidopsis also via Autophagy Related Pathway?

Tamara Pečenková, Peter Sabol, Ivan Kulich, Jitka Ortmannová, Viktor Žárský

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. International journal of molecular sciences · 2020
    Article
  5. Tethering Complexes in the Arabidopsis Endomembrane System.Frontiers in cell and developmental biology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Tamara PečenkováLaboratory of Cell Biology, Institute of Experimental Botany, Academy of Sciences of Czech RepublicPrague, Czech Republic; Laboratory of Cell Morphogenesis, Department of Experimental Plant Biology, Faculty of Science, Charles University in PraguePrague, Czech Republic.
Peter SabolLaboratory of Cell Morphogenesis, Department of Experimental Plant Biology, Faculty of Science, Charles University in Prague Prague, Czech Republic.
Ivan KulichLaboratory of Cell Morphogenesis, Department of Experimental Plant Biology, Faculty of Science, Charles University in Prague Prague, Czech Republic.
Jitka OrtmannováLaboratory of Cell Biology, Institute of Experimental Botany, Academy of Sciences of Czech RepublicPrague, Czech Republic; Laboratory of Cell Morphogenesis, Department of Experimental Plant Biology, Faculty of Science, Charles University in PraguePrague, Czech Republic.
Viktor ŽárskýLaboratory of Cell Biology, Institute of Experimental Botany, Academy of Sciences of Czech RepublicPrague, Czech Republic; Laboratory of Cell Morphogenesis, Department of Experimental Plant Biology, Faculty of Science, Charles University in PraguePrague, Czech Republic.
Charles University · CZCzech Academy of Sciences, Institute of Experimental Botany · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Even though resistance (R) genes are among the most studied components of the plant immunity, there remain still a lot of aspects to be explained about the regulation of their function. Many gain-of-function mutants of R genes and loss-of-function of their regulators often demonstrate up-regulated defense responses in combination with dwarf stature and/or spontaneous leaf lesions formation. For most of these mutants, phenotypes are a consequence of an ectopic activation of R genes. Based on the compilation and comparison of published results in this field, we have concluded that the constitutively activated defense phenotypes recurrently arise by disruption of tight, constitutive and multilevel negative control of some of R proteins that might involve also their targeting to the autophagy pathway. This mode of R protein regulation is supported also by protein-protein interactions listed in available databases, as well as in silico search for autophagy machinery interacting motifs. The suggested model could resolve some explanatory discrepancies found in the studies of the immunity responses of autophagy mutants.

Indexed as

autophagyAvrdwarfETIexocystlesionsRresistance

Identifiers

PMID26973696
PMCPMC4777726
OpenAlexW2298512779

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.