Evidence map›Paper›PMID 26972614›Full record

ArticleHippocampus2016

Age-related changes in Egr1 transcription and DNA methylation within the hippocampus.

M R Penner, R R Parrish, L T Hoang, T L Roth, F D Lubin, C A Barnes

Abstract read
In one paragraph

Article in Hippocampus, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 85 citations in OpenAlex.

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  16. 'Arc'-hitecture of normal cognitive aging.Ageing research reviews · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

M R PennerEvelyn F McKnight Brain Institute and Division of Neural Systems, Memory and Aging, University of Arizona, Tucson, Arizona.
R R ParrishDepartment of Neurobiology and Evelyn F McKnight Brain Institute, University of Alabama at Birmingham, Birmingham, Alabama.
L T HoangEvelyn F McKnight Brain Institute and Division of Neural Systems, Memory and Aging, University of Arizona, Tucson, Arizona.
T L RothDepartment of Psychology, University of Delaware, Newark, Delaware.
F D LubinDepartment of Neurobiology and Evelyn F McKnight Brain Institute, University of Alabama at Birmingham, Birmingham, Alabama.
C A BarnesEvelyn F McKnight Brain Institute and Division of Neural Systems, Memory and Aging, University of Arizona, Tucson, Arizona.
University of Arizona · USUniversity of Alabama at Birmingham · USUniversity of Delaware · US

Funding

Biochemical Mechanisms of Neural PlasticityR01MH057014 · NIMH · VANDERBILT UNIVERSITY · PI WINDER, DANNY G. · 1996 to 2019
$9.3M
TRANSCRIPTION FACTOR GENES,NEURONAL PLASTICITY AND AGINGR01AG009219 · NIA · UNIVERSITY OF ARIZONA · PI BARNES, CAROL A. · 1991 to 2006
$3.5M
Trophic Interactions of Nerve and MuscleR01AG031722 · NIA · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SWEATT, JOHN DAVID · 2007 to 2011
$1.6M
NIA NIH HHS R01 AG009219NIA NIH HHS R01 AG031722NIMH NIH HHS R01 MH057014
6 · The paper itself

Abstract

Aged animals show functional alterations in hippocampal neurons that lead to deficits in synaptic plasticity and changes in cognitive function. Transcription of immediate-early genes (IEGs), including Egr1, is necessary for processes such as long-term potentiation and memory consolidation. Here, we show an age-related reduction in the transcription of Egr1 in the dentate gyrus following spatial behavior, whereas in the area CA1, Egr1 is reduced at rest, but its transcription can be effectively driven by spatial behavior to levels equivalent to those observed in adult animals. One mechanism possibly contributing to these aging-related changes is an age-associated, CpG site-specific change in methylation in DNA associated with the promoter region of the Egr1 gene. Our results add to a growing body of work demonstrating that complex transcriptional and epigenetic changes in the hippocampus significantly contribute to brain and cognitive aging. © 2016 Wiley Periodicals, Inc.

Indexed as

DNA MethylationAgingAnimalsCA1 Region, HippocampalCpG IslandsDentate GyrusEarly Growth Response Protein 1MaleMotor ActivityPromoter Regions, GeneticRats, Inbred F344RNA, MessengerSpatial MemoryTranscription, GeneticEarly Growth Response Protein 1Egr1 protein, ratRNA, Messengeragingepigenetic modulationmemorytranscriptional regulation

Identifiers

PMID26972614
PMCPMC4949137
OpenAlexW2294727406

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.