Evidence map›Paper›PMID 26969700›Full record

ArticleApplied and environmental microbiology2016

Transcriptional Profile during Deoxycholate-Induced Sporulation in a Clostridium perfringens Isolate Causing Foodborne Illness.

Mayo Yasugi, Daisuke Okuzaki, Ritsuko Kuwana, Hiromu Takamatsu, Masaya Fujita, Mahfuzur R Sarker, Masami Miyake

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 31 citations in OpenAlex.

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  9. The 'Gut microbes · 2020
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  14. Enterotoxic Clostridia:Microbiology spectrum · 2018
    Article
  15. Effects of Bile Acids and Nisin on the Production of Enterotoxin byInternational journal of microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Mayo YasugiGraduate School of Life and Environmental Sciences, Osaka Prefecture University, Izumisano, Osaka, Japan shishimaru@vet.osakafu-u.ac.jp.
Daisuke OkuzakiDNA Chip Development Center, RIMD, Osaka University, Suita, Osaka, Japan.
Ritsuko KuwanaFaculty of Pharmaceutical Sciences, Setsunan University, Hirakata, Osaka, Japan.
Hiromu TakamatsuFaculty of Pharmaceutical Sciences, Setsunan University, Hirakata, Osaka, Japan.
Masaya FujitaBiology and Biochemistry Department, University of Houston, Houston, Texas, USA.
Mahfuzur R SarkerDepartment of Biomedical Sciences, Oregon State University, Corvallis, Oregon, USA.
Masami MiyakeGraduate School of Life and Environmental Sciences, Osaka Prefecture University, Izumisano, Osaka, Japan.
Osaka Prefecture University · JPSetsunan University · JPOregon State University · USOsaka University · JPUniversity of Houston · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledClostridium perfringens type A is a common source of foodborne illness (FBI) in humans. Vegetative cells sporulate in the small intestinal tract and produce the major pathogenic factor C. perfringens enterotoxin. Although sporulation plays a critical role in the pathogenesis of FBI, the mechanisms inducing sporulation remain unclear. Bile salts were shown previously to induce sporulation, and we confirmed deoxycholate (DCA)-induced sporulation in C. perfringens strain NCTC8239 cocultured with human intestinal epithelial Caco-2 cells. In the present study, we performed transcriptome analyses of strain NCTC8239 in order to elucidate the mechanism underlying DCA-induced sporulation. Of the 2,761 genes analyzed, 333 were up- or downregulated during DCA-induced sporulation and included genes for cell division, nutrient metabolism, signal transduction, and defense mechanisms. In contrast, the virulence-associated transcriptional regulators (the VirR/VirS system, the agr system, codY, and abrB) were not activated by DCA. DCA markedly increased the expression of signaling molecules controlled by Spo0A, the master regulator of the sporulation process, whereas the expression of spo0A itself was not altered in the presence or absence of DCA. The phosphorylation of Spo0A was enhanced in the presence of DCA. Collectively, these results demonstrated that DCA induced sporulation, at least partially, by facilitating the phosphorylation of Spo0A and activating Spo0A-regulated genes in strain NCTC8239 while altering the expression of various genes. IMPORTANCE: Disease caused by Clostridium perfringens type A consistently ranks among the most common bacterial foodborne illnesses in humans in developed countries. The sporulation of C. perfringens in the small intestinal tract is a key event for its pathogenesis, but the factors and underlying mechanisms by which C. perfringens sporulates in vivo currently remain unclear. Bile salts, major components of bile, which is secreted from the liver for the emulsification of lipids, were shown to induce sporulation. However, the mechanisms underlying bile salt-induced sporulation have not yet been clarified. In the present study, we demonstrate that deoxycholate (one of the bile salts) induces sporulation by facilitating the phosphorylation of Spo0A and activating Spo0A-regulated genes using a transcriptome analysis. Thus, this study enhances our understanding of the mechanisms underlying sporulation, particularly that of bile salt-induced sporulation, in C. perfringens.

Indexed as

Gene Expression ProfilingClostridium InfectionsClostridium perfringensDeoxycholic AcidFoodborne DiseasesHumansSpores, BacterialDeoxycholic Acid

Identifiers

PMID26969700
PMCPMC4959072
OpenAlexW2294199231

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.