Evidence map›Paper›PMID 26969021›Full record

ArticlePlanta2016

Membrane proteins involved in transport, vesicle traffic and Ca(2+) signaling increase in beetroots grown in saline soils.

Bárbara Lino, Alicia Chagolla, Luis E González de la Vara

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Bárbara LinoDepartamento de Biotecnología y Bioquímica, Unidad Irapuato, Cinvestav-IPN. Km 9.6 Libramiento Norte, 36821, Irapuato, Gto, Mexico.
Alicia ChagollaDepartamento de Biotecnología y Bioquímica, Unidad Irapuato, Cinvestav-IPN. Km 9.6 Libramiento Norte, 36821, Irapuato, Gto, Mexico.
Luis E González de la VaraDepartamento de Biotecnología y Bioquímica, Unidad Irapuato, Cinvestav-IPN. Km 9.6 Libramiento Norte, 36821, Irapuato, Gto, Mexico. lgonzale@ira.cinvestav.mx.
Center for Research and Advanced Studies of the National Polytechnic Institute · MXInstituto Politécnico Nacional · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionBy separating plasma membrane proteins according to their hydropathy from beetroots grown in saline soils, several proteins probably involved in salt tolerance were identified by mass spectrometry. Beetroots, as a salt-tolerant crop, have developed mechanisms to cope with stresses associated with saline soils. To observe which plasma membrane (PM) proteins were more abundant in beet roots grown in saline soils, beet root plants were irrigated with water or 0.2 M NaCl. PM-enriched membrane preparations were obtained from these plants, and their proteins were separated according to their hydropathy by serial phase partitioning with Triton X-114. Some proteins whose abundance increased visibly in membranes from salt-grown beetroots were identified by mass spectrometry. Among them, there was a V-type H(+)-ATPase (probably from contaminating vacuolar membranes), which increased with salt at all stages of beetroots' development. Proteins involved in solute transport (an H(+)-transporting PPase and annexins), vesicle traffic (clathrin and synaptotagmins), signal perception and transduction (protein kinases and phospholipases, mostly involved in calcium signaling) and metabolism, appeared to increase in salt-grown beetroot PM-enriched membranes. These results suggest that PM and vacuolar proteins involved in transport, metabolism and signal transduction increase in beet roots adapted to saline soils. In addition, these results show that serial phase partitioning with Triton X-114 is a useful method to separate membrane proteins for their identification by mass spectrometry.

Indexed as

Beta vulgarisBiological TransportCalciumCell MembraneElectrophoresis, Polyacrylamide GelHydrophobic and Hydrophilic InteractionsMass SpectrometryMembrane ProteinsPlant ProteinsPlant RootsSodium ChlorideSoilTransport VesiclesVacuolar Proton-Translocating ATPasesCalciumMembrane ProteinsPlant ProteinsSodium ChlorideSoilVacuolar Proton-Translocating ATPasesBeta vulgarisMass spectrometryPlasma membrane proteinsSalt toleranceTriton X-114

Identifiers

PMID26969021
OpenAlexW2295069589

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.