Evidence map›Paper›PMID 26966259›Full record

ArticleG3 (Bethesda, Md.)2016

Characterization of Chicken MMP13 Expression and Genetic Effect on Egg Production Traits of Its Promoter Polymorphisms.

Zhenjie Yuan, Yuxia Chen, Qiuyue Chen, Miao Guo, Li Kang, Guiyu Zhu, Yunliang Jiang

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zhenjie YuanDepartment of Genetics, College of Agronomy, Shandong Agricultural University, Taian 271018, China.
Yuxia ChenDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Taian 271018, China.
Qiuyue ChenDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Taian 271018, China.
Miao GuoDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Taian 271018, China.
Li KangDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Taian 271018, China.
Guiyu ZhuDepartment of Biology Science and Technology, Taishan University, Taian 271000, China.
Yunliang JiangDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Taian 271018, China yljiang723@aliyun.com.
Shandong Agricultural University · CNTaishan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Extracelluar matrix undergoes constant remodeling, cell-cell, and cell-matrix interactions during chicken ovarian follicle growth, which is coordinated by matrix metalloproteinases (MMPs), and their associated endogenous inhibitors (TIMPs). Transcriptome analysis revealed upregulation of MMP13 in sexually mature chicken ovaries. In this study, we found that the expression of MMP13 in chicken ovary was stably elevated from 60 d to 159 d, and was significantly higher at 159 d than at the other three developmental stages (P < 0.05). The expression of MMP13 mRNA increased from SW (small white follicles) to F5 (fifth largest follicles), then decreased to F1 (first largest follicles), and dramatically increased again in POF1 (newly postovulatory follicles) follicles (P < 0.05). The MMP13 protein was localized in stroma cells and primordial follicles of sexually immature chicken ovaries, in the theca cell layers of all sized follicles of sexually mature chicken ovaries. Furthermore, we identified a positive element (positions -1863 to -1036) controlling chicken MMP13 transcription, and, in this region, six single nucleotide polymorphisms were found and genotyped in chicken populations. In the White Recessive Rock population, hens with A(-1356)-C(-1079)/A(-1356)-C(-1079) genotype had earlier "age at first laying" than those with G(-1356)-T(-1079)/G(-1356)-T(-1079) genotype (P < 0.05), and exhibited significantly lower transcriptional activity (P < 0.01). Collectively, chicken MMP13 plays an important role in ovarian follicle growth and regression, and polymorphisms in its promoter region could be used as molecular markers for improving the trait "age at first laying" in chicken breeding.

Indexed as

Gene ExpressionPolymorphism, GeneticPromoter Regions, GeneticQuantitative Trait, HeritableAnimalsChickensEggsFemaleImmunohistochemistryLinkage DisequilibriumMatrix Metalloproteinase 13Ovarian FollicleOvaryReproductionSequence DeletionMatrix Metalloproteinase 13age at first layingchickenfollicleMMP13polymorphism

Identifiers

PMID26966259
PMCPMC4856082
OpenAlexW2406273446

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.