ArticlePlant physiology2016
Programming of Plant Leaf Senescence with Temporal and Inter-Organellar Coordination of Transcriptome in Arabidopsis.
Abstract read
In one paragraph
Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.
0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
82 citing papers in PubMed.
- The old nourishes the new: 100 years of leaf senescence studies in Plant Physiology.Plant physiology · 2026Review
- The SVP-FRO6 Module Integrates the Control of Leaf Senescence and Flowering in Arabidopsis.Plant, cell & environment · 2026Article
- SnRK2.4 and SnRK2.10 redundantly control developmental leaf senescence by sustaining ABA production and signaling.Plant physiology · 2026Article
- Arabidopsis WSS1A, a DNA-protein crosslink repair protease, delays leaf senescence in cooperation with SUMO3.The Plant journal : for cell and molecular biology · 2026Article
- Regulatory Role of Jasmonate Signaling in Dark-, Drought-, and Salt-Induced Leaf Senescence.International journal of molecular sciences · 2026Review
- The chloroplast-targeted long noncoding RNA CHLORELLA mediates chloroplast functional transition across leaf ageing via anterograde signalling.Nature plants · 2025Article
- The leaves fall, yet the tree endures.Cellular and molecular life sciences : CMLS · 2025Review
- Genome-Wide Isoform Switching Reveals SR45-Mediated Splicing Control ofInternational journal of molecular sciences · 2025Article
- A single-base mutation on the 5' UTR of BrATG5 confers the premature leaf senescence phenotype in Chinese cabbage.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Integrative analyses reveal Bna-miR397a-BnaLAC2 as a potential modulator of low-temperature adaptability in Brassica napus L.Plant biotechnology journal · 2025Article
- Stable and dynamic gene expression patterns over diurnal and developmental timescales in Arabidopsis thaliana.The New phytologist · 2025Article
- RH3 enhances antiviral defense by facilitating small RNA loading into Argonaute 2 at endoplasmic reticulum-chloroplast membrane contact sites.Nature communications · 2025Article
- Genetic Foundation of Leaf Senescence: Insights from Natural and Cultivated Plant Diversity.Plants (Basel, Switzerland) · 2024Review
- WHIRLY proteins, multi-layer regulators linking the nucleus and organelles in developmental and stress-induced senescence of plants.Annals of botany · 2024Review
- Single-plant-omics reveals the cascade of transcriptional changes during the vegetative-to-reproductive transition.The Plant cell · 2024Article
- TheInternational journal of molecular sciences · 2024Article
- AraLeTA: An Arabidopsis leaf expression atlas across diurnal and developmental scales.Plant physiology · 2024Article
- Decrypting plant tissues: From bulk to cell-type transcriptional profiles.Plant physiology · 2024Article
- Comprehensive Proteome and Acetylome Analysis of Needle Senescence inInternational journal of molecular sciences · 2024Article
- Genome-wide expression analysis of vegetative organs during developmental and herbicide-induced whole plant senescence in Arabidopsis thaliana.BMC genomics · 2024Article
22 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
22 authors.
Hye Ryun WooDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.) polim@dgist.ac.kr.
Hee Jung KooDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Jeongsik KimDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Hyobin JeongDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Jin Ok YangDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Il Hwan LeeDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Ji Hyung JunDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Seung Hee ChoiDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Su Jin ParkDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Byeongsoo KangDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
You Wang KimDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Bong-Kwan PheeDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Jin Hee KimDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Chaehwa SeoDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Charny ParkDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Sang Cheol KimDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Seongjin ParkDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Byungwook LeeDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Sanghyuk LeeDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Daehee HwangDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.).
Hong Gil NamDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.) polim@dgist.ac.kr.
Pyung Ok LimDepartment of New Biology, DGIST, Daegu, Republic of Korea (H.R.W., D.H., H.G.N., P.O.L.);Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea (H.J.K., J.K., H.J., I.H.L., S.H.C., S.J.P., B.K., Y.W.K., B.-K.P., J.H.K., D.H., H.G.N.);School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang, Republic of Korea (H.J.K.);Korean Bioinformation Center, KRIBB, Daejeon, Republic of Korea (J.O.Y., S.C.K., S.P., B.L.);Division of Molecular Life Sciences, POSTECH, Pohang, Republic of Korea (I.H.L., J.H.J., S.H.C.);Division of Integrative Biosciences and Biotechnologies, POSTECH, Pohang, Republic of Korea (S.J.P.);DNA Link Inc., Seoul, Republic of Korea (C.S.); andEwha Research Center for Systems Biology and Department of Life Science, Ewha Womans University, Seoul, Republic of Korea (C.P., S.L.) polim@dgist.ac.kr.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Plant leaves, harvesting light energy and fixing CO2, are a major source of foods on the earth. Leaves undergo developmental and physiological shifts during their lifespan, ending with senescence and death. We characterized the key regulatory features of the leaf transcriptome during aging by analyzing total- and small-RNA transcriptomes throughout the lifespan of Arabidopsis (Arabidopsis thaliana) leaves at multidimensions, including age, RNA-type, and organelle. Intriguingly, senescing leaves showed more coordinated temporal changes in transcriptomes than growing leaves, with sophisticated regulatory networks comprising transcription factors and diverse small regulatory RNAs. The chloroplast transcriptome, but not the mitochondrial transcriptome, showed major changes during leaf aging, with a strongly shared expression pattern of nuclear transcripts encoding chloroplast-targeted proteins. Thus, unlike animal aging, leaf senescence proceeds with tight temporal and distinct interorganellar coordination of various transcriptomes that would be critical for the highly regulated degeneration and nutrient recycling contributing to plant fitness and productivity.
Indexed as
Gene Expression Regulation, PlantTranscriptomeAntisense Elements (Genetics)ArabidopsisArabidopsis ProteinsChloroplastsGene Expression ProfilingGene Regulatory NetworksOrganellesPlant LeavesRNA, Small UntranslatedTime FactorsTranscription FactorsAntisense Elements (Genetics)Arabidopsis ProteinsRNA, Small UntranslatedTranscription Factors
Identifiers
What OpenQuestion holds
Textmetadata
Read underepoch 390
Registered trials
None linked
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.