ArticlePloS one2016
Diversity, Mutation and Recombination Analysis of Cotton Leaf Curl Geminiviruses.
Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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Who cites it
23 citing papers in PubMed.
- DeepTYLCV: An interpretable and experimentally validated AI model for predicting virulence of different tomato yellow leaf curl virus strains.Plant communications · 2026Article
- Diversity, recombination and misclassification in the family Geminiviridae: Insight from bioinformatics analysis.PloS one · 2026Article
- Article
- Emergence of begomoviruses and DNA satellites associated with weeds and intercrops: a potential threat to sustainable production of cassava in Côte d'Ivoire.Frontiers in plant science · 2025Article
- In Silico Investigation of the Interactions Between Cotton Leaf Curl Multan Virus Proteins and the Transcriptional Gene Silencing Factors of Gossypium hirsutum L.Journal of molecular evolution · 2024Article
- Patterns of Genetic Diversity among Alphasatellites InfectingPathogens (Basel, Switzerland) · 2022Article
- Roles of two distinct alphasatellites modulating geminivirus pathogenesis.Virology journal · 2021Article
- Natural occurrence of mesta yellow vein mosaic virus and DNA-satellites in ornamental sunflower (Saudi journal of biological sciences · 2021Article
- Occurrence of Cotton leaf curl Multan virus and associated betasatellites with leaf curl disease of Bhut-Jolokia chillies (Capsicum chinense Jacq.) in India.Molecular biology reports · 2021Article
- Molecular phylogenetics and evolutionary analysis of a highly recombinant begomovirus, Cotton leaf curl Multan virus, and associated satellites.Virus evolution · 2021Article
- Bibliometric analysis of publications on research into cotton leaf curl disease.Discoveries (Craiova, Romania) · 2020Review
- Dominance of recombinant cotton leaf curl Multan-Rajasthan virus associated with cotton leaf curl disease outbreak in northwest India.PloS one · 2020Article
- Biology and Interaction of the Natural Occurrence of Distinct Monopartite Begomoviruses Associated With Satellites inFrontiers in microbiology · 2020Article
- Non-cultivated Cotton Species (Plants (Basel, Switzerland) · 2019Article
- Diversity and recombination analysis of Cotton leaf curl Multan virus: a highly emerging begomovirus in northern India.BMC genomics · 2019Article
- Characterization, phylogeny and recombination analysis of Pedilanthus leaf curl virus-Petunia isolate and its associated betasatellite.Virology journal · 2018Article
- Rebound of Cotton leaf curl Multan virus and its exclusive detection in cotton leaf curl disease outbreak, Punjab (India), 2015.Scientific reports · 2017Article
- Infectivity of Deinbollia mosaic virus, a novel weed-infecting begomovirus in East Africa.Archives of virology · 2017Article
- An Insight into Cotton Leaf Curl Multan Betasatellite, the Most Important Component of Cotton Leaf Curl Disease Complex.Viruses · 2017Review
- Multiple begomoviruses found associated with cotton leaf curl disease in Pakistan in early 1990 are back in cultivated cotton.Scientific reports · 2017Article
Corrections and comments
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Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The spread of cotton leaf curl disease in China, India and Pakistan is a recent phenomenon. Analysis of available sequence data determined that there is a substantial diversity of cotton-infecting geminiviruses in Pakistan. Phylogenetic analyses indicated that recombination between two major groups of viruses, cotton leaf curl Multan virus (CLCuMuV) and cotton leaf curl Kokhran virus (CLCuKoV), led to the emergence of several new viruses. Recombination detection programs and phylogenetic analyses showed that CLCuMuV and CLCuKoV are highly recombinant viruses. Indeed, CLCuKoV appeared to be a major donor virus for the coat protein (CP) gene, while CLCuMuV donated the Rep gene in the majority of recombination events. Using recombination free nucleotide datasets the substitution rates for CP and Rep genes were determined. We inferred similar nucleotide substitution rates for the CLCuMuV-Rep gene (4.96X10-4) and CLCuKoV-CP gene (2.706X10-4), whereas relatively higher substitution rates were observed for CLCuMuV-CP and CLCuKoV-Rep genes. The combination of sequences with equal and relatively low substitution rates, seemed to result in the emergence of viral isolates that caused epidemics in Pakistan and India. Our findings also suggest that CLCuMuV is spreading at an alarming rate, which can potentially be a threat to cotton production in the Indian subcontinent.
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