Evidence map›Paper›PMID 26963385›Full record

ArticlePloS one2016

Pathway Implications of Aberrant Global Methylation in Adrenocortical Cancer.

Christophe R Legendre, Michael J Demeure, Timothy G Whitsett, Gerald C Gooden, Kimberly J Bussey, Sungwon Jung, Tembe Waibhav, Seungchan Kim, Bodour Salhia

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 45 citations in OpenAlex.

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  9. NAR cancer · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Christophe R LegendreTranslational Genomics Research Institute, Phoenix, AZ, United States of America.
Michael J DemeureTranslational Genomics Research Institute, Phoenix, AZ, United States of America.
Timothy G WhitsettTranslational Genomics Research Institute, Phoenix, AZ, United States of America.
Gerald C GoodenTranslational Genomics Research Institute, Phoenix, AZ, United States of America.
Kimberly J BusseyTranslational Genomics Research Institute, Phoenix, AZ, United States of America.
Sungwon JungDepartment of Genome Medicine and Science, Gachon University School of Medicine, Incheon, 21565, Republic of Korea.
Tembe WaibhavTranslational Genomics Research Institute, Phoenix, AZ, United States of America.
Seungchan KimTranslational Genomics Research Institute, Phoenix, AZ, United States of America.
Bodour SalhiaTranslational Genomics Research Institute, Phoenix, AZ, United States of America.
Translational Genomics Research Institute · USGachon University Gil Medical Center · KRPhoenix (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

contextAdrenocortical carcinomas (ACC) are a rare tumor type with a poor five-year survival rate and limited treatment options.

objectiveUnderstanding of the molecular pathogenesis of this disease has been aided by genomic analyses highlighting alterations in TP53, WNT, and IGF signaling pathways. Further elucidation is needed to reveal therapeutically actionable targets in ACC.

designIn this study, global DNA methylation levels were assessed by the Infinium HumanMethylation450 BeadChip Array on 18 ACC tumors and 6 normal adrenal tissues. A new, non-linear correlation approach, the discretization method, assessed the relationship between DNA methylation/gene expression across ACC tumors.

resultsThis correlation analysis revealed epigenetic regulation of genes known to modulate TP53, WNT, and IGF signaling, as well as silencing of the tumor suppressor MARCKS, previously unreported in ACC.

conclusionsDNA methylation may regulate genes known to play a role in ACC pathogenesis as well as known tumor suppressors.

Indexed as

Adrenal Cortex NeoplasmsAdrenocortical CarcinomaDNA MethylationDNA, NeoplasmGene Expression Regulation, NeoplasticNeoplasm ProteinsSignal TransductionFemaleHumansMaleDNA, NeoplasmNeoplasm Proteins

Identifiers

PMID26963385
PMCPMC4786116
OpenAlexW2295096370

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.