Evidence map›Paper›PMID 26962139›Full record

ArticleProceedings. Biological sciences2016

Substituting mouse transcription factor Pou4f2 with a sea urchin orthologue restores retinal ganglion cell development.

Chai-An Mao, Cavit Agca, Julie A Mocko-Strand, Jing Wang, Esther Ullrich-Lüter, Ping Pan, Steven W Wang, Maria Ina Arnone, Laura J Frishman, William H Klein

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings. Biological sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. A missense mutation inJournal of neurophysiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Chai-An MaoDepartment of Systems Biology, Unit 0950, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID http://orcid.org/0000-0002-9700-6964
Cavit AgcaDepartment of Systems Biology, Unit 0950, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID http://orcid.org/0000-0001-8472-7052
Julie A Mocko-StrandCollege of Optometry, University of Houston, Houston, TX 77204, USA.
Jing WangCollege of Optometry, University of Houston, Houston, TX 77204, USA.
Esther Ullrich-LüterMuseum für Naturkunde, Berlin 10115, Germany.
Ping PanDepartment of Systems Biology, Unit 0950, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Steven W WangDepartment of Systems Biology, Unit 0950, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Maria Ina ArnoneBiology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn, Naples 80121, Italy.
Laura J FrishmanCollege of Optometry, University of Houston, Houston, TX 77204, USA.
William H KleinDepartment of Systems Biology, Unit 0950, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA whklein@mdanderson.org.
The University of Texas MD Anderson Cancer Center · USUniversity of Houston · USMuseum für Naturkunde · DEStazione Zoologica Anton Dohrn · IT

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
Research Programming ModuleP30EY007551 · NEI · UNIVERSITY OF HOUSTON · PI VALLABH E DAS · 1988 to 2026
$16.4M
VISION RESEARCHP30EY010608 · NEI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MASSEY, STEPHEN C · 1994 to 2014
$7.9M
Optic nerve regeneration: gene networks in retina developmentR01EY011930 · NEI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KLEIN, WILLIAM H. · 1997 to 2016
$5.3M
The role of T-box transcriptional regulator Tbr2 in the development of ipRGCsR01EY024376 · NEI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI MAO, CHAI-AN · 2015 to 2024
$3.9M
Manipulating retinal progenitor cellsR21EY019015 · NEI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KLEIN, WILLIAM H. · 2009 to 2010
$421k
NCI NIH HHS CA016672NCI NIH HHS P30 CA016672NEI NIH HHS EY010608-139005NEI NIH HHS EY011930NEI NIH HHS EY019015NEI NIH HHS EY024376NEI NIH HHS EY07551NEI NIH HHS P30 EY007551NEI NIH HHS R01 EY011930NEI NIH HHS R01 EY024376NEI NIH HHS R21 EY019015
6 · The paper itself

Abstract

Pou domain transcription factor Pou4f2 is essential for the development of retinal ganglion cells (RGCs) in the vertebrate retina. A distant orthologue of Pou4f2 exists in the genome of the sea urchin (class Echinoidea) Strongylocentrotus purpuratus (SpPou4f1/2), yet the photosensory structure of sea urchins is strikingly different from that of the mammalian retina. Sea urchins have no obvious eyes, but have photoreceptors clustered around their tube feet disc. The mechanisms that are associated with the development and function of photoreception in sea urchins are largely unexplored. As an initial approach to better understand the sea urchin photosensory structure and relate it to the mammalian retina, we asked whether SpPou4f1/2 could support RGC development in the absence of Pou4f2. To answer this question, we replaced genomic Pou4f2 with an SpPou4f1/2 cDNA. In Pou4f2-null mice, retinas expressing SpPou4f1/2 were outwardly identical to those of wild-type mice. SpPou4f1/2 retinas exhibited dark-adapted electroretinogram scotopic threshold responses, indicating functionally active RGCs. During retinal development, SpPou4f1/2 activated RGC-specific genes and in S. purpuratus, SpPou4f2 was expressed in photoreceptor cells of tube feet in a pattern distinct from Opsin4 and Pax6. Our results suggest that SpPou4f1/2 and Pou4f2 share conserved components of a gene network for photosensory development and they maintain their conserved intrinsic functions despite vast morphological differences in mouse and sea urchin photosensory structures.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsEmbryo, MammalianEmbryo, NonmammalianHomeodomain ProteinsMiceRetinal Ganglion CellsStrongylocentrotus purpuratusTranscription Factor Brn-3BHomeodomain ProteinsPou4f2 protein, mouseTranscription Factor Brn-3Bechinoderm photoreceptorsPou4f2/Brn3bretinal developmentretinal ganglion cellstranscription factor evolution

Identifiers

PMID26962139
PMCPMC4810862
OpenAlexW2296686341

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.