Evidence map›Paper›PMID 26961568›Full record

ArticleScientific reports2016

Comparing the defence-related gene expression changes upon root-knot nematode attack in susceptible versus resistant cultivars of rice.

Chanchal Kumari, Tushar K Dutta, Prakash Banakar, Uma Rao

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
22.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 104 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Combating Root-Knot Nematodes (Plants (Basel, Switzerland) · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. RNA-Seq of Cyst Nematode Infestation of Potato (Plants (Basel, Switzerland) · 2022
    Article
  16. Article
  17. Biology · 2021
    Review
  18. Article
  19. Efficacy of a Chitin-Based Water-Soluble Derivative in InducingInternational journal of molecular sciences · 2021
    Article
  20. Multiseriate cortical sclerenchyma enhance root penetration in compacted soils.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Chanchal KumariDivision of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Tushar K DuttaDivision of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Prakash BanakarDivision of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Uma RaoDivision of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Indian Agricultural Research Institute · INKIIT University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice is one of the major staple food crops in the world and an excellent model system for studying monocotyledonous plants. Diseases caused by nematodes in rice are well documented and among them, root-knot nematode (RKN), Meloidogyne graminicola, causes extensive yield decline. It is therefore necessary to identify novel sources of natural resistance to RKN in rice and to investigate the rice-RKN interaction in detail to understand the basal plant defence mechanisms and nematode manipulation of the host physiology. To this end, six different cultivars of rice were initially screened for RKN infection and development; Pusa 1121 and Vandana were found to be most susceptible and resistant to RKN infection, respectively. In order to investigate the role of major hormone-regulated plant defence pathways in compatible/incompatible rice-RKN interaction, some well-identified marker genes involved in salicylate/jasmonate/ethylene pathway were evaluated for their differential expression through qRT-PCR. In general, our study shows a remarkable discrepancy in the expression pattern of those genes between compatible and incompatible rice-RKN interaction. As most information on the molecular interplay between plants and nematodes were generated on dicotyledonous plants, the current study will strengthen our basic understanding of plant-nematode interaction in the monocot crops, which will aid in defining future strategies for best plant health measures.

Indexed as

TylenchoideaAnimalsGene Expression Regulation, PlantOryzaPlant DiseasesPlant Growth RegulatorsPlant RootsPlant Growth Regulators

Identifiers

PMID26961568
PMCPMC4785349
OpenAlexW2296575246

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.