Evidence map›Paper›PMID 26960768›Full record

ArticleBMC cancer2016

miRNA profiling, detection of BRAF V600E mutation and RET-PTC1 translocation in patients from Novosibirsk oblast (Russia) with different types of thyroid tumors.

Sergei E Titov, Mikhail K Ivanov, Elena V Karpinskaya, Elena V Tsivlikova, Sergei P Shevchenko, Yulia A Veryaskina, Larisa G Akhmerova, Tatiana L Poloz, Olesya A Klimova, Lyudmila F Gulyaeva and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
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  3. CouldDiagnostics (Basel, Switzerland) · 2024
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  14. MiR-150 Inhibits Cell Growth In Vitro and In Vivo by Restraining the RAB11A/WNT/β-Catenin Pathway in Thyroid Cancer.Medical science monitor : international medical journal of experimental and clinical research · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 1 country.

Sergei E TitovInstitute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia. titovse78@gmail.com.
Mikhail K IvanovJSC "Vector-Best", Koltsovo, Russia.
Elena V KarpinskayaNovosibirsk Municipal Budgetary Healthcare Institution "Municipal Clinical Hospital #1", Novosibirsk, Russia.
Elena V TsivlikovaJSC "Vector-Best", Koltsovo, Russia.
Sergei P ShevchenkoNovosibirsk Municipal Budgetary Healthcare Institution "Municipal Clinical Hospital #1", Novosibirsk, Russia.
Yulia A VeryaskinaInstitute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia.
Larisa G AkhmerovaInstitute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia.
Tatiana L PolozNon-governmental Healthcare Institution «Railroad Clinical Hospital on the Station Novosibirsk-Glavny", JSC Russian Railways, Novosibirsk, Russia.
Olesya A KlimovaInstitute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia.
Lyudmila F GulyaevaInstitute of Molecular Biology and Biophysics, SB RAMS, Novosibirsk, Russia.
Igor F ZhimulevInstitute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia.
Nikolay N KolesnikovInstitute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia.
Siberian Branch of the Russian Academy of Sciences · RUState Research Center of Virology and Biotechnology VECTOR · RUCity Clinical Hospital · RUInstitute of Molecular and Cell Biology · RUInstitute of Molecular Biology and Biophysics · RURussian Railways · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe postoperative typing of thyroid lesions, which is instrumental in adequate patient treatment, is currently based on histologic examination. However, it depends on pathologist's qualification and can be difficult in some cases. Numerous studies have shown that molecular markers such as microRNAs and somatic mutations may be useful to assist in these cases, but no consensus exists on the set of markers that is optimal for that purpose. The aim of the study was to discriminate between different thyroid neoplasms by RT-PCR, using a limited set of microRNAs selected from literature.

methodsBy RT-PCR we evaluated the relative levels of 15 microRNAs (miR-221, -222, -146b, -181b, -21, -187, -199b, -144, -192, -200a, -200b, -205, -141, -31, -375) and the presence of BRAF(V600E) mutation and RET-PTC1 translocation in surgically resected lesions from 208 patients from Novosibirsk oblast (Russia) with different types of thyroid neoplasms. Expression of each microRNA was normalized to adjacent non-tumor tissue. Three pieces of lesion tissue from each patient (39 goiters, 41 follicular adenomas, 16 follicular thyroid cancers, 108 papillary thyroid cancers, 4 medullary thyroid cancers) were analyzed independently to take into account method variation.

resultsThe diagnostic classifier based on profiling of 13 microRNAs was proposed, with total estimated accuracy varying from 82.7 to 99% for different nodule types. Relative expression of six microRNAs (miR-146b, -21, -221, -222, 375, -199b) appeared significantly different in BRAF(V600E)-positive samples (all classified as papillary thyroid carcinomas) compared to BRAF(V600E)-negative papillary carcinoma samples.

conclusionsThe results confirm practical feasibility of using molecular markers for typing of thyroid neoplasms and clarification of controversial cases.

Indexed as

Adenocarcinoma, FollicularAdultAgedBiomarkers, TumorCarcinomaCarcinoma, NeuroendocrineCarcinoma, PapillaryFemaleGene Expression Regulation, NeoplasticHumansMaleMicroRNAsMiddle AgedOncogene Proteins, FusionProtein-Tyrosine KinasesProto-Oncogene Proteins B-rafBiomarkers, TumorBRAF protein, humanMicroRNAsOncogene Proteins, FusionProtein-Tyrosine KinasesProto-Oncogene Proteins B-rafret-PTC fusion oncoproteins, human

Identifiers

PMID26960768
PMCPMC4784369
OpenAlexW2295719517

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.