Evidence map›Paper›PMID 26960694›Full record

ArticleBMC genomics2016

Genome-wide association between single nucleotide polymorphisms with beef fatty acid profile in Nellore cattle using the single step procedure.

Marcos V A Lemos, Hermenegildo Lucas Justino Chiaia, Mariana Piatto Berton, Fabieli L B Feitosa, Carolyn Aboujaoud, Gregório M F Camargo, Angélica S C Pereira, Lucia G Albuquerque, Adrielle M Ferrinho, Lenise F Mueller and 11 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
10.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 94 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 3 institutions in 2 countries.

Marcos V A LemosDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil. marcoslemoszootec@gmail.com.
Hermenegildo Lucas Justino ChiaiaDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil.
Mariana Piatto BertonDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil.
Fabieli L B FeitosaDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil.
Carolyn AboujaoudDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil.
Gregório M F CamargoDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil.
Angélica S C PereiraDepartamento de Nutrição e Produção Animal, Faculdade de Medicina Veterinária e Zootecnia, Universidade de São Paulo, Avenida Duque de Caxias Norte, 225, CEP 13635-900, Pirassununga, São Paulo, Brazil. angelpereira@usp.br.
Lucia G AlbuquerqueDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil.
Adrielle M FerrinhoDepartamento de Nutrição e Produção Animal, Faculdade de Medicina Veterinária e Zootecnia, Universidade de São Paulo, Avenida Duque de Caxias Norte, 225, CEP 13635-900, Pirassununga, São Paulo, Brazil.
Lenise F MuellerDepartamento de Nutrição e Produção Animal, Faculdade de Medicina Veterinária e Zootecnia, Universidade de São Paulo, Avenida Duque de Caxias Norte, 225, CEP 13635-900, Pirassununga, São Paulo, Brazil.
Monica R MazalliDepartamento de Nutrição e Produção Animal, Faculdade de Medicina Veterinária e Zootecnia, Universidade de São Paulo, Avenida Duque de Caxias Norte, 225, CEP 13635-900, Pirassununga, São Paulo, Brazil.
Joyce J M FurlanDepartamento de Nutrição e Produção Animal, Faculdade de Medicina Veterinária e Zootecnia, Universidade de São Paulo, Avenida Duque de Caxias Norte, 225, CEP 13635-900, Pirassununga, São Paulo, Brazil.
Roberto CarvalheiroDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil.
Daniel M GordoDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil.
Rafael TonussiDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil.
Rafael EspigolanDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil.
Rafael Medeiros de Oliveira SilvaDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil.
Henrique Nunes de OliveiraDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil.
Susan DuckettDepartment of Animal and Veterinary Science, Clemson University, Clemson, SC, USA.
Ignacio AguilarDepartment of Animal Breeding Montevideo, National Institute of Agricultural Research of Uruguayy, Montevideo, Uruguay.
Fernando BaldiDepartamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Via de acesso Prof. Paulo Donato Castellane, s/no, CEP 14884-900, Jaboticabal, São Paulo, Brazil. fernandobaldiuy@gmail.com.
Universidade Estadual Paulista (Unesp) · BRUniversidade de São Paulo · BRClemson University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSaturated fatty acids can be detrimental to human health and have received considerable attention in recent years. Several studies using taurine breeds showed the existence of genetic variability and thus the possibility of genetic improvement of the fatty acid profile in beef. This study identified the regions of the genome associated with saturated, mono- and polyunsaturated fatty acids, and n-6 to n-3 ratios in the Longissimus thoracis of Nellore finished in feedlot, using the single-step method.

resultsThe results showed that 115 windows explain more than 1 % of the additive genetic variance for the 22 studied fatty acids. Thirty-one genomic regions that explain more than 1 % of the additive genetic variance were observed for total saturated fatty acids, C12:0, C14:0, C16:0 and C18:0. Nineteen genomic regions, distributed in sixteen different chromosomes accounted for more than 1 % of the additive genetic variance for the monounsaturated fatty acids, such as the sum of monounsaturated fatty acids, C14:1 cis-9, C18:1 trans-11, C18:1 cis-9, and C18:1 trans-9. Forty genomic regions explained more than 1 % of the additive variance for the polyunsaturated fatty acids group, which are related to the total polyunsaturated fatty acids, C20:4 n-6, C18:2 cis-9 cis12 n-6, C18:3 n-3, C18:3 n-6, C22:6 n-3 and C20:3 n-6 cis-8 cis-11 cis-14. Twenty-one genomic regions accounted for more than 1 % of the genetic variance for the group of omega-3, omega-6 and the n-6:n-3 ratio.

conclusionsThe identification of such regions and the respective candidate genes, such as ELOVL5, ESSRG, PCYT1A and genes of the ABC group (ABC5, ABC6 and ABC10), should contribute to form a genetic basis of the fatty acid profile of Nellore (Bos indicus) beef, contributing to better selection of the traits associated with improving human health.

Indexed as

Polymorphism, Single NucleotideRed MeatAnimalsCattleFatty AcidsGenetic Association StudiesGenetic VariationGenotypeMaleQuantitative Trait LociFatty Acids

Identifiers

PMID26960694
PMCPMC4784275
OpenAlexW2294375720

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