Evidence map›Paper›PMID 26959483›Full record

ArticlePediatric research2016

Altered gene expression and possible immunodeficiency in cases of sudden infant death syndrome.

Linda Ferrante, Torleiv O Rognum, Åshild Vege, Ståle Nygård, Siri H Opdal

Open access · bronzeAbstract read
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In one paragraph

Article in Pediatric research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
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  11. Noncardiac genetic predisposition in sudden infant death syndrome.Genetics in medicine : official journal of the American College of Medical Genetics · 2019
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Linda FerranteDepartment of Pediatric Forensic Medicine, Norwegian Institute of Public Health, Oslo, Norway.ORCID 0000-0003-1642-2737
Torleiv O RognumDepartment of Pediatric Forensic Medicine, Norwegian Institute of Public Health, Oslo, Norway.
Åshild VegeDepartment of Pediatric Forensic Medicine, Norwegian Institute of Public Health, Oslo, Norway.
Ståle NygårdBioinformatics Core Facility, Institute for Medical Informatics, Oslo University Hospital, Oslo, Norway.
Siri H OpdalDepartment of Pediatric Forensic Medicine, Norwegian Institute of Public Health, Oslo, Norway.
Norwegian Institute of Public Health · NOOslo University Hospital · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundA large number of studies have tried to uncover a genetic predisposition for sudden infant death syndrome (SIDS), but there is still uncertainty concerning the pathogenesis of these deaths. The purpose of this study was to investigate mRNA gene expression in SIDS cases and controls, in order to uncover genes that are differentially expressed in the two groups.

methodsTissue from brain, heart, and liver from 15 SIDS cases and 15 controls were included in the study, and mRNA expression was determined using the Illumina whole genome gene expression DASL HT assay.

resultsSeventeen genes showed significantly altered expression compared to controls, after correction for multiple testing. Three genes involved in the immune system were of particular interest, including the downregulation of MyD88 in tissue from SIDS brains, as well as the downregulation of the genes encoding CCL3 and UNC13 in the liver.

conclusionThese findings indicate that there is an altered expression of genes involved in the inflammatory process in a proportion of SIDS cases, which further strengthen the hypothesis that impaired immune response play a role in this syndrome.

Indexed as

Case-Control StudiesChemokine CCL3Child, PreschoolFemaleGene Expression ProfilingGenetic Predisposition to DiseaseHumansImmune SystemImmunologic Deficiency SyndromesInfantLiverMaleMyeloid Differentiation Factor 88Nerve Tissue ProteinsOligonucleotide Array Sequence AnalysisRNA, MessengerCCL3 protein, humanChemokine CCL3MYD88 protein, humanMyeloid Differentiation Factor 88Nerve Tissue ProteinsRNA, MessengerUNC13B protein, human

Identifiers

PMID26959483
OpenAlexW2296476618

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.