Evidence map›Paper›PMID 26958170›Full record

ArticleAMIA ... Annual Symposium proceedings. AMIA Symposium

Similarity-Based Recommendation of New Concepts to a Terminology.

Praveen Chandar, Anil Yaman, Julia Hoxha, Zhe He, Chunhua Weng

Abstract read
In one paragraph

Article in AMIA ... Annual Symposium proceedings. AMIA Symposium. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. The use of SNOMED CT, 2013-2020: a literature review.Journal of the American Medical Informatics Association : JAMIA · 2021
    Review
  3. A Lexical-based Formal Concept Analysis Method to Identify Missing Concepts in the NCI Thesaurus.Proceedings. IEEE International Conference on Bioinformatics and Biomedicine · 2020
    Article
  4. Article
  5. Extended Analysis of Topological-Pattern-Based Ontology Enrichment.Proceedings. IEEE International Conference on Bioinformatics and Biomedicine · 2018
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Praveen ChandarDepartment of Biomedical Informatics, Columbia University, New York, NY USA.
Anil YamanDepartment of Biomedical Informatics, Columbia University, New York, NY USA.
Julia HoxhaDepartment of Biomedical Informatics, Columbia University, New York, NY USA.
Zhe HeDepartment of Biomedical Informatics, Columbia University, New York, NY USA.
Chunhua WengDepartment of Biomedical Informatics, Columbia University, New York, NY USA.

Funding

Clinical and Translational Science AwardUL1TR000040 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GINSBERG, HENRY N · 2012 to 2015
$26.2M
Bridging the Semantic Gap Between Research Eligibility Criteria and Clinical DataR01LM009886 · NLM · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WENG, CHUNHUA · 2009 to 2020
$5.3M
NCATS NIH HHS UL1 TR000040NLM NIH HHS R01 LM009886
6 · The paper itself

Abstract

Terminologies can suffer from poor concept coverage due to delays in addition of new concepts. This study tests a similarity-based approach to recommending concepts from a text corpus to a terminology. Our approach involves extraction of candidate concepts from a given text corpus, which are represented using a set of features. The model learns the important features to characterize a concept and recommends new concepts to a terminology. Further, we propose a cost-effective evaluation methodology to estimate the effectiveness of terminology enrichment methods. To test our methodology, we use the clinical trial eligibility criteria free-text as an example text corpus to recommend concepts for SNOMED CT. We computed precision at various rank intervals to measure the performance of the methods. Results indicate that our automated algorithm is an effective method for concept recommendation.

Indexed as

Systematized Nomenclature of MedicineTerminology as TopicAlgorithmsComputer SimulationInformation Storage and Retrieval

Identifiers

PMID26958170
PMCPMC4765685

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.