Evidence map›Paper›PMID 26957604›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Rapid expansion of the protein disulfide isomerase gene family facilitates the folding of venom peptides.

Helena Safavi-Hemami, Qing Li, Ronneshia L Jackson, Albert S Song, Wouter Boomsma, Pradip K Bandyopadhyay, Christian W Gruber, Anthony W Purcell, Mark Yandell, Baldomero M Olivera and 1 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  6. Structural similarities reveal an expansive conotoxin family with a two-finger toxin fold.Protein science : a publication of the Protein Society · 2025
    Article
  7. Cnidarian toxins: omics approaches and recombinant proteins.The journal of venomous animals and toxins including tropical diseases · 2025
    Article
  8. Article
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  12. Journal of microbiology and biotechnology · 2024
    Article
  13. Article
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  15. Article
  16. An ancient, conserved gene regulatory network led to the rise of oral venom systems.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  17. Proteomic analysis of Red SeaThe journal of venomous animals and toxins including tropical diseases · 2021
    Article
  18. Review
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 4 countries.

Helena Safavi-HemamiDepartment of Biology, University of Utah, Salt Lake City, UT 84112; Department of Biology, University of Copenhagen, DK-2200 Copenhagen, Denmark; helena.safavi@utah.edu olivera@biology.utah.edu.
Qing LiEccles institute of Human Genetics, University of Utah, Salt Lake City, UT 84112;
Ronneshia L JacksonDepartment of Biology, University of Utah, Salt Lake City, UT 84112;
Albert S SongDepartment of Biology, University of Utah, Salt Lake City, UT 84112;
Wouter BoomsmaDepartment of Biology, University of Copenhagen, DK-2200 Copenhagen, Denmark;
Pradip K BandyopadhyayDepartment of Biology, University of Utah, Salt Lake City, UT 84112;
Christian W GruberCenter for Physiology and Pharmacology, Medical University of Vienna, A-1090, Vienna, Austria; School of Biomedical Sciences, University of Queensland, St. Lucia, Queensland 4072, Australia;
Anthony W PurcellInfection and Immunity Program, Monash Biomedicine Discovery Institute, Monash University, Clayton, Victoria 3800, Australia; Department of Biochemistry and Molecular Biology, Monash University, Clayton, Victoria 3800, Australia;
Mark YandellEccles institute of Human Genetics, University of Utah, Salt Lake City, UT 84112; Utah Science Technology and Research Center for Genetic Discovery, University of Utah, Salt Lake City, UT 84112.
Baldomero M OliveraDepartment of Biology, University of Utah, Salt Lake City, UT 84112; helena.safavi@utah.edu olivera@biology.utah.edu.
Lars EllgaardDepartment of Biology, University of Copenhagen, DK-2200 Copenhagen, Denmark;ORCID http://orcid.org/0000-0002-7018-0137
University of Utah · USUniversity of Copenhagen · DKAustralian Regenerative Medicine Institute · AUThe University of Queensland · AU

Funding

Venoms, Biological Resources, Molecular BiologyP01GM048677 · NIGMS · UNIVERSITY OF UTAH · PI BANDYOPADHYAY, PRADIP K · 1993 to 2018
$32.2M
Genomics-based Venom Studies Using the Cone Snail C. BullatusR01GM099939 · NIGMS · UNIVERSITY OF UTAH · PI YANDELL, MARK DOUGLAS · 2012 to 2015
$1.1M
Medical Research CouncilNIGMS NIH HHS GM 099939NIGMS NIH HHS GM 48677NIGMS NIH HHS P01 GM048677NIGMS NIH HHS R01 GM099939
6 · The paper itself

Abstract

Formation of correct disulfide bonds in the endoplasmic reticulum is a crucial step for folding proteins destined for secretion. Protein disulfide isomerases (PDIs) play a central role in this process. We report a previously unidentified, hypervariable family of PDIs that represents the most diverse gene family of oxidoreductases described in a single genus to date. These enzymes are highly expressed specifically in the venom glands of predatory cone snails, animals that synthesize a remarkably diverse set of cysteine-rich peptide toxins (conotoxins). Enzymes in this PDI family, termed conotoxin-specific PDIs, significantly and differentially accelerate the kinetics of disulfide-bond formation of several conotoxins. Our results are consistent with a unique biological scenario associated with protein folding: The diversification of a family of foldases can be correlated with the rapid evolution of an unprecedented diversity of disulfide-rich structural domains expressed by venomous marine snails in the superfamily Conoidea.

Indexed as

Amino Acid SequenceAnimalsConus SnailMolecular Sequence DataMollusk VenomsPeptidesProtein Disulfide-IsomerasesProtein FoldingSequence Homology, Amino AcidMollusk VenomsPeptidesProtein Disulfide-Isomerasescone snail venomconotoxinsgene expansionpeptide foldingprotein disulfide isomerase

Identifiers

PMID26957604
PMCPMC4812716
OpenAlexW2294115391

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.