Evidence map›Paper›PMID 26957223›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2016

Evaluating the Safety of Retroviral Vectors Based on Insertional Oncogene Activation and Blocked Differentiation in Cultured Thymocytes.

Sheng Zhou, Soghra Fatima, Zhijun Ma, Yong-Dong Wang, Taihe Lu, Laura J Janke, Yang Du, Brian P Sorrentino

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Review
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  6. Article
  7. Review
  8. Development of anMolecular therapy. Methods & clinical development · 2023
    Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. A review of the underlying genetics and emerging therapies for canine cardiomyopathies.Journal of veterinary cardiology : the official journal of the European Society of Veterinary Cardiology · 2022
    Review
  15. Article
  16. Predicting genotoxicity of viral vectors for stem cell gene therapy using gene expression-based machine learning.Molecular therapy : the journal of the American Society of Gene Therapy · 2021
    Article
  17. 3' UTR-truncated HMGA2 overexpression induces non-malignantMolecular therapy. Methods & clinical development · 2021
    Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Sheng ZhouDivision of Experimental Hematology, Department of Hematology, Memphis, Tennessee, USA.
Soghra FatimaDivision of Experimental Hematology, Department of Hematology, Memphis, Tennessee, USA.
Zhijun MaDivision of Experimental Hematology, Department of Hematology, Memphis, Tennessee, USA.
Yong-Dong WangDepartment of Computational Biology, Memphis, Tennessee, USA.
Taihe LuDivision of Experimental Hematology, Department of Hematology, Memphis, Tennessee, USA.
Laura J JankeDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Yang DuDepartment of Pediatrics, Uniformed Services University of the Health Sciences, Bethesda, Maryland, USA.
Brian P SorrentinoDivision of Experimental Hematology, Department of Hematology, Memphis, Tennessee, USA. Electronic address: brian.sorrentino@stjude.org.
University of Tennessee Health Science Center · USSt. Jude Children's Research Hospital · USUniformed Services University of the Health Sciences · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
VIROSOME/PROTEOLIPOSOME MEDIATED GENE TRANSFERP01HL053749 · NHLBI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI WEISS, MITCHELL J · 1994 to 2022
$43.6M
NCI NIH HHS P30 CA021765NHLBI NIH HHS P01 HL053749
6 · The paper itself

Abstract

Insertional oncogenesis due to retroviral (RV) vector integration has caused recurrent leukemia in multiple gene therapy trials, predominantly due to vector integration effects at the LMO2 locus. While currently available preclinical safety models have been used for evaluating vector safety, none have predicted or reproduced the recurrent LMO2 integrations seen in previous X-linked severe combined immunodeficiency (X-SCID) and Wiskott-Aldrich clinical gene therapy trials. We now describe a new assay for assessing vector safety that recapitulates naturally occurring insertions into Lmo2 and other T-cell proto-oncogenes leading to a preleukemic developmental arrest in primary murine thymocytes cultured in vitro. This assay was used to compare the relative oncogenic potential of a variety of gamma-RV and lentiviral vectors and to assess the risk conferred by various transcriptional elements contained in these genomes. Gamma-RV vectors that contained full viral long-terminal repeats were most prone to causing double negative 2 (DN2) arrest and led to repeated cases of Lmo2 pathway activation, while lentiviral vectors containing these same elements were significantly less prone to activate proto-oncogenes or cause DN2 arrest. This work provides a new preclinical assay that is especially relevant for assessing safety in SCID disorders and provides a new tool for designing safer RV vectors.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsCell DifferentiationCells, CulturedDisease Models, AnimalGammaretrovirusGenetic VectorsHumansLentivirusLIM Domain ProteinsMEF2 Transcription FactorsMiceMutagenesis, InsertionalPrecursor T-Cell Lymphoblastic Leukemia-LymphomaThymocytesUp-RegulationAdaptor Proteins, Signal TransducingLIM Domain ProteinsLmo2 protein, mouseMef2c protein, mouseMEF2 Transcription Factors

Identifiers

PMID26957223
PMCPMC4923324
OpenAlexW2293164235

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.