Evidence map›Paper›PMID 26955400›Full record

ArticleThe journal of physical chemistry. C, Nanomaterials and interfaces2015

Denoising Stimulated Raman Spectroscopic Images by Total Variation Minimization.

Chien-Sheng Liao, Joon Hee Choi, Delong Zhang, Stanley H Chan, Ji-Xin Cheng

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry. C, Nanomaterials and interfaces, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 46 citations in OpenAlex.

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  11. In Situ and In Vivo Molecular Analysis by Coherent Raman Scattering Microscopy.Annual review of analytical chemistry (Palo Alto, Calif.) · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Chien-Sheng LiaoWeldon School of Biomedical Engineering, Purdue University, West Lafayette, IN 47907, USA.
Joon Hee ChoiSchool of Electrical and Computer Engineering, Purdue University, West Lafayette, IN 47907, USA.
Delong ZhangWeldon School of Biomedical Engineering, Purdue University, West Lafayette, IN 47907, USA.
Stanley H ChanSchool of Electrical and Computer Engineering, Purdue University, West Lafayette, IN 47907, USA; Department of Statistics, Purdue University, West Lafayette, IN 47907, USA.
Ji-Xin ChengWeldon School of Biomedical Engineering, Purdue University, West Lafayette, IN 47907, USA; School of Electrical and Computer Engineering, Purdue University, West Lafayette, IN 47907, USA; Department of Chemistry, Purdue University, West Lafayette, IN 47907, USA; Purdue University Center for Cancer Research, Purdue University, West Lafayette, IN 47907, USA; Birck Nanotechnology Center, Purdue University, West Lafayette, IN 47907, USA.
Purdue University West Lafayette · US

Funding

Quantitative Spectroscopic Imaging of Cancer Metabolites in Live Cells and IntactR21CA182608 · NCI · PURDUE UNIVERSITY · PI CHENG, JI-XIN · 2013 to 2015
$654k
Microsecond Raman spectroscopy: Assessing single cell metabolism in a vital organismR21GM114853 · NIGMS · PURDUE UNIVERSITY · PI CHENG, JI-XIN · 2014 to 2015
$449k
NCI NIH HHS R21 CA182608NIGMS NIH HHS R21 GM114853
6 · The paper itself

Abstract

High-speed coherent Raman scattering imaging is opening a new avenue to unveiling the cellular machinery by visualizing the spatio-temporal dynamics of target molecules or intracellular organelles. By extracting signals from the laser at MHz modulation frequency, current stimulated Raman scattering (SRS) microscopy has reached shot noise limited detection sensitivity. The laser-based local oscillator in SRS microscopy not only generates high levels of signal, but also delivers a large shot noise which degrades image quality and spectral fidelity. Here, we demonstrate a denoising algorithm that removes the noise in both spatial and spectral domains by total variation minimization. The signal-to-noise ratio of SRS spectroscopic images was improved by up to 57 times for diluted dimethyl sulfoxide solutions and by 15 times for biological tissues. Weak Raman peaks of target molecules originally buried in the noise were unraveled. Coupling the denoising algorithm with multivariate curve resolution allowed discrimination of fat stores from protein-rich organelles in

Indexed as

Imaging processingLabel-free microscopyNon-linear microscopyRaman spectroscopy

Identifiers

PMID26955400
PMCPMC4779315
OpenAlexW2301089013

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.