Evidence map›Paper›PMID 26954587›Full record

ArticleScientific reports2016

miR-429 regulates the transition between Hypoxia-Inducible Factor (HIF)1A and HIF3A expression in human endothelial cells.

Anna Janaszak-Jasiecka, Sylwia Bartoszewska, Kinga Kochan, Arkadiusz Piotrowski, Leszek Kalinowski, Wojciech Kamysz, Renata J Ochocka, Rafał Bartoszewski, James F Collawn

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Upregulation ofInternational journal of molecular sciences · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Anna Janaszak-JasieckaDepartment of Biology and Pharmaceutical Botany, Medical University of Gdansk, Gdansk, Poland.
Sylwia BartoszewskaDepartment of Inorganic Chemistry, Medical University of Gdansk, Gdansk, Poland.
Kinga KochanDepartment of Biology and Pharmaceutical Botany, Medical University of Gdansk, Gdansk, Poland.
Arkadiusz PiotrowskiDepartment of Biology and Pharmaceutical Botany, Medical University of Gdansk, Gdansk, Poland.
Leszek KalinowskiDepartment of Medical Laboratory Diagnostics, Medical University of Gdansk, Gdansk, Poland.
Wojciech KamyszDepartment of Inorganic Chemistry, Medical University of Gdansk, Gdansk, Poland.
Renata J OchockaDepartment of Biology and Pharmaceutical Botany, Medical University of Gdansk, Gdansk, Poland.
Rafał BartoszewskiDepartment of Biology and Pharmaceutical Botany, Medical University of Gdansk, Gdansk, Poland.
James F CollawnDepartment of Cell, Developmental and Integrative Biology, University of Alabama at Birmingham, Birmingham, USA.

Funding

Cell Biology of CFTR in Polarized EpitheliaR01DK060065 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI COLLAWN, JAMES F. · 2003 to 2013
$3.1M
NIDDK NIH HHS 5R01DK060065NIDDK NIH HHS R01 DK060065
6 · The paper itself

Abstract

Hypoxia-inducible factors (HIF) are heterodimeric transcription factors that allow cells to adapt and survive during hypoxia. Regulation of HIF1A and HIF2A mRNA is well characterized, whereas HIF3A mRNA regulation and function are less clear. Using RNA-Seq analysis of primary human umbilical vein endothelial cells, we found two isoforms of HIF3A were expressed, HIF3A2 and HIF3A3. Comparing HIF3A expression profiles to HIF1A mRNA during 48 hours of hypoxia revealed that HIF1A message peaked at 4 hours, whereas HIF3A expression increased while HIF1A was decreasing. Given that HIF1A mRNA is regulated by miR-429, we tested miR-429 effects on both HIF3A isoforms and found that they too were regulated by miR-429. Analysis of a HIF-3 target, DNA-damage-inducible transcript 4, a key survival gene, indicated that DDIT4 mRNA is induced by HIF-3 and negatively regulated by miR-429 through miR-429's actions on HIF3A message. This provides a compelling model for how hypoxia-induced miR-429 regulates the switch between HIF-1 adaptive responses to HIF-3 survival responses by rapidly decreasing HIF1A levels while simultaneously slowing the progression of HIF3A expression until the miR-429 levels drop below normoxic levels. Since HIF-1 drives HIF3A and miR-429 expression, this establishes a regulatory network in which miR-429 plays a pivotal role.

Indexed as

Cell HypoxiaGene Expression RegulationApoptosis Regulatory ProteinsBasic Helix-Loop-Helix ProteinsCells, CulturedGene Expression ProfilingHumansHuman Umbilical Vein Endothelial CellsHypoxia-Inducible Factor 1, alpha SubunitMicroRNAsRepressor ProteinsApoptosis Regulatory ProteinsBasic Helix-Loop-Helix ProteinsHIF1A protein, humanHIF3A protein, humanHypoxia-Inducible Factor 1, alpha SubunitMicroRNAsMIRN429 microRNA, humanRepressor Proteins

Identifiers

PMID26954587
PMCPMC4782134

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.