Evidence map›Paper›PMID 26954550›Full record

ArticleDevelopmental cell2016

Repression of Pumilio Protein Expression by Rbfox1 Promotes Germ Cell Differentiation.

Arnaldo Carreira-Rosario, Varsha Bhargava, Jens Hillebrand, Rahul K Kollipara, Mani Ramaswami, Michael Buszczak

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 98 citations in OpenAlex.

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  17. Genetic and Epigenetic Regulation ofJournal of developmental biology · 2023
    Review
  18. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Arnaldo Carreira-RosarioDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Varsha BhargavaDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Jens HillebrandSchool of Genetics and Microbiology and School of Natural Sciences, Smurfit Institute of Genetics and Trinity College Institute of Neuroscience, Trinity College Dublin, Dublin 2, Ireland.
Rahul K KolliparaMcDermott Center for Human Growth and Development, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Mani RamaswamiSchool of Genetics and Microbiology and School of Natural Sciences, Smurfit Institute of Genetics and Trinity College Institute of Neuroscience, Trinity College Dublin, Dublin 2, Ireland.
Michael BuszczakDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: michael.buszczak@utsouthwestern.edu.
The University of Texas Southwestern Medical Center · USTrinity College Dublin · IESouthwestern Medical Center · US

Funding

Systematic Characterization of an Aging Stem Cell NicheR01AG047318 · NIA · UT SOUTHWESTERN MEDICAL CENTER · PI BUSZCZAK, MICHAEL · 2015 to 2019
$1.7M
Decoding Stem Cell Chromatin Using DrosophilaR01GM086647 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI BUSZCZAK, MICHAEL · 2009 to 2013
$1.5M
Genetics Training ProgramT32GM083831 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI ABRAMS, JOHN M · 2009 to 2013
$765k
Mechanisms of Disease & Translational ScienceT32GM109776 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI YIN, HELEN L · 2014 to 2018
$573k
Molecular characterization of a novel function of the RNA-binding protein RbfoxF31GM105332 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI CARREIRA-ROSARIO, ARNALDO · 2013 to 2014
$45k
Howard Hughes Medical Institute 56006776NIA NIH HHS R01 AG047318NIA NIH HHS R01AG047318NIGMS NIH HHS F31 GM105332NIGMS NIH HHS F31GM105332NIGMS NIH HHS R01 GM086647NIGMS NIH HHS R01GM086647NIGMS NIH HHS T32 GM083831NIGMS NIH HHS T32GM083831NIGMS NIH HHS T32 GM109776NIGMS NIH HHS T32GM10977601
6 · The paper itself

Abstract

RNA-binding Fox (Rbfox) proteins have well-established roles in regulating alternative splicing, but specific Rbfox isoforms lack nuclear localization signals and accumulate in the cytoplasm. The potential splicing-independent functions of these proteins remain unknown. Here we demonstrate that cytoplasmic Drosophila Rbfox1 regulates germ cell development and represses the translation of mRNAs containing (U)GCAUG elements within their 3'UTRs. During germline cyst differentiation, Rbfox1 targets pumilio mRNA for destabilization and translational silencing, thereby promoting germ cell development. Mis-expression of pumilio results in the formation of germline tumors, which contain cysts that break down and dedifferentiate back to single, mitotically active cells. Together, these results reveal that cytoplasmic Rbfox family members regulate the translation of specific target mRNAs. In the Drosophila ovary, this activity provides a genetic barrier that prevents germ cells from reverting back to an earlier developmental state. The finding that Rbfox proteins regulate mRNA translation has implications for Rbfox-related diseases.

Indexed as

Alternative SplicingAnimalsCell DifferentiationCytoplasmDrosophila melanogasterDrosophila ProteinsFemaleGene Expression Regulation, DevelopmentalGerm CellsOvaryRNA-Binding ProteinsRNA, MessengerDrosophila ProteinsRbfox1 protein, DrosophilaRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID26954550
PMCPMC4785839
OpenAlexW2293141188

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.