Evidence map›Paper›PMID 26953887›Full record

ArticlePloS one2016

Serotypes and Clonal Diversity of Streptococcus pneumoniae Causing Invasive Disease in the Era of PCV13 in Catalonia, Spain.

Eva Del Amo, Cristina Esteva, Susanna Hernandez-Bou, Carmen Galles, Marian Navarro, Goretti Sauca, Alvaro Diaz, Paula Gassiot, Carmina Marti, Nieves Larrosa and 5 more

Abstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Trial
  2. Article
  3. Comparative Genotyping of Malaysian Clinical Isolates ofThe Malaysian journal of medical sciences : MJMS · 2025
    Article
  4. Article
  5. Article
  6. Genomic surveillance of invasiveMicrobial genomics · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Changes in the pneumococcal disease-related hospitalisations in Spain after the replacement of 7-valent by 13-valent conjugate vaccine.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2017
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Eva Del AmoDepartment of Molecular Microbiology, Hospital Sant Joan de Deu, Esplugues de Llobregat, Spain.
Cristina EstevaDepartment of Molecular Microbiology, Hospital Sant Joan de Deu, Esplugues de Llobregat, Spain.
Susanna Hernandez-BouDepartment of Paediatrics, Hospital Sant Joan de Deu and University of Barcelona, Esplugues de Llobregat, Spain.
Carmen GallesDepartment of Microbiology, Hospital Sant Jaume, Calella, Spain.
Marian NavarroDepartment of Microbiology, Hospital de Vic, Vic. Spain.
Goretti SaucaDepartment of Microbiology, Hospital de Mataró, Mataró, Spain.
Alvaro DiazDepartment of Microbiology, Hospital de Nens, Barcelona, Spain.
Paula GassiotDepartment of Microbiology, Hospital de Figueres, Figueres, Spain.
Carmina MartiDepartment of Microbiology, Hospital General de Granollers, Granollers, Spain.
Nieves LarrosaDepartment of Microbiology, Hospital Vall d'Hebron, Barcelona, Spain.
Pilar CiruelaPublic Health Agency, Government of Catalonia, Barcelona, Spain.
Mireia JanePublic Health Agency, Government of Catalonia, Barcelona, Spain.
Raquel Sá-LeãoLaboratory of Molecular Microbiology of Human Pathogens, Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa, Oeiras, Portugal.
Carmen Muñoz-AlmagroDepartment of Molecular Microbiology, Hospital Sant Joan de Deu, Esplugues de Llobregat, Spain.
Catalan Study Group of Invasive Pneumococcal Disease

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this study was to study the serotypes and clonal diversity of pneumococci causing invasive pneumococcal disease in Catalonia, Spain, in the era of 13-valent pneumococcal conjugate vaccine (PCV13). In our region, this vaccine is only available in the private market and it is estimated a PCV13 vaccine coverage around 55% in children. A total of 1551 pneumococcal invasive isolates received between 2010 and 2013 in the Molecular Microbiology Department at Hospital Sant Joan de Déu, Barcelona, were included. Fifty-two serotypes and 249 clonal types-defined by MLST-were identified. The most common serotypes were serotype 1 (n = 182; 11.7%), 3 (n = 145; 9.3%), 19A (n = 137; 8.8%) and 7F (n = 122; 7.9%). Serotype 14 was the third most frequent serotype in children < 2 years (15 of 159 isolates). PCV7 serotypes maintained their proportion along the period of study, 16.6% in 2010 to 13.4% in 2013, whereas there was a significant proportional decrease in PCV13 serotypes, 65.3% in 2010 to 48.9% in 2013 (p<0.01). This decrease was mainly attributable to serotypes 19A and 7F. Serotype 12F achieved the third position in 2013 (n = 22, 6.4%). The most frequent clonal types found were ST306 (n = 154, 9.9%), ST191 (n = 111, 7.2%), ST989 (n = 85, 5.5%) and ST180 (n = 80, 5.2%). Despite their decrease, PCV13 serotypes continue to be a major cause of disease in Spain. These results emphasize the need for complete PCV13 vaccination.

Indexed as

AdolescentAdultAgedAged, 80 and overAnti-Bacterial AgentsChildChild, PreschoolFemaleGenetic VariationHumansMaleMicrobial Sensitivity TestsMiddle AgedMultilocus Sequence TypingPneumococcal InfectionsPneumococcal Vaccines13-valent pneumococcal vaccineAnti-Bacterial AgentsPneumococcal Vaccines

Identifiers

PMID26953887
PMCPMC4783110

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.