Evidence map›Paper›PMID 26950744›Full record

ArticleNature methods2016

A saposin-lipoprotein nanoparticle system for membrane proteins.

Jens Frauenfeld, Robin Löving, Jean-Paul Armache, Andreas F-P Sonnen, Fatma Guettou, Per Moberg, Lin Zhu, Caroline Jegerschöld, Ali Flayhan, John A G Briggs and 4 more

Abstract read
In one paragraph

Article in Nature methods, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 161 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
161citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

161 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Interactive segmentation of membrane and membrane-mimic densities in cryo-EM maps.Acta crystallographica. Section D, Structural biology · 2026
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  6. A sensory system for mating in octopus.Science (New York, N.Y.) · 2026
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  10. Structural basis of G6P/Pi transport and inhibition in SLC37A4.Nature structural & molecular biology · 2026
    Article
  11. Integrated Modular Workflows for Membrane Protein Production in HEK293 Cells.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  12. Article
  13. Article
  14. Examining the thermotropic properties of large circularized nanodiscs.Biochimica et biophysica acta. Biomembranes · 2025
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Advances in native cell membrane nanoparticles system.Current opinion in structural biology · 2025
    Review
  20. Article

101 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Jens FrauenfeldDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.
Robin LövingDepartment of Biosciences and Nutrition, Karolinska Institutet, Huddinge, Sweden.
Jean-Paul ArmacheKeck Advanced Microscopy Laboratory, Department of Biochemistry and Biophysics, University of California San Francisco, San Francisco, California, USA.
Andreas F-P SonnenStructural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.
Fatma GuettouDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.
Per MobergDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.
Lin ZhuDepartment of Biosciences and Nutrition, Karolinska Institutet, Huddinge, Sweden.
Caroline JegerschöldDepartment of Biosciences and Nutrition, Karolinska Institutet, Huddinge, Sweden.
Ali FlayhanEMBL Hamburg, Hamburg, Germany.
John A G BriggsStructural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.
Henrik GaroffDepartment of Biosciences and Nutrition, Karolinska Institutet, Huddinge, Sweden.
Christian LöwDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.
Yifan ChengKeck Advanced Microscopy Laboratory, Department of Biochemistry and Biophysics, University of California San Francisco, San Francisco, California, USA.
Pär NordlundDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.

Funding

X-ray Screening and Rapid Structure DeterminationP50GM082250 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KROGAN, NEVAN J · 2007 to 2018
$48.8M
Structures and gating mechanisms of TRP ion channelsR01GM098672 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHENG, YIFAN · 2011 to 2018
$2.6M
Linux cluster for near atomic resolution single particle cryo-EMS10OD020054 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHENG, YIFAN · 2015 to 2015
$456k
Howard Hughes Medical InstituteNIGMS NIH HHS P50 GM082250NIGMS NIH HHS P50GM082250NIGMS NIH HHS R01 GM098672NIGMS NIH HHS R01GM098672NIH HHS 1S10OD020054NIH HHS S10 OD020054
6 · The paper itself

Abstract

A limiting factor in membrane protein research is the ability to solubilize and stabilize such proteins. Detergents are used most often for solubilizing membrane proteins, but they are associated with protein instability and poor compatibility with structural and biophysical studies. Here we present a saposin-lipoprotein nanoparticle system, Salipro, which allows for the reconstitution of membrane proteins in a lipid environment that is stabilized by a scaffold of saposin proteins. We demonstrate the applicability of the method on two purified membrane protein complexes as well as by the direct solubilization and nanoparticle incorporation of a viral membrane protein complex from the virus membrane. Our approach facilitated high-resolution structural studies of the bacterial peptide transporter PeptTSo2 by single-particle cryo-electron microscopy (cryo-EM) and allowed us to stabilize the HIV envelope glycoprotein in a functional state.

Indexed as

Bacterial ProteinsCryoelectron MicroscopyHIV Envelope Protein gp120HumansLipidsMembrane ProteinsNanoparticlesProtein ConformationSaposinsSymportersBacterial ProteinsHIV Envelope Protein gp120hydrogen-coupled oligopeptide transporter PepT2LipidsMembrane ProteinsSaposinsSymporters

Identifiers

PMID26950744
PMCPMC4894539

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.